RNA–Protein interactions for RNA: ENST00000472217.1

USF1-204, Transcript of upstream transcription factor 1, humanhuman

TSL 2

Gene USF1, Length 1,097 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-204ENST00000472217 MRPL28Q13084 256 aaKnown RBP7.29□□□□□ -1.24
USF1-204ENST00000472217 DYNC1I2Q13409 638 aaKnown RBP7.29□□□□□ -1.24
USF1-204ENST00000472217 FAM189A2Q15884 450 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 SSX2Q16385 188 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 SMN1Q16637 294 aaKnown RBP7.29□□□□□ -1.24
USF1-204ENST00000472217 LIAT1Q6ZQX7 453 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 TRAPPC6BQ86SZ2 158 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 SAXO1Q8IYX7 474 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 OR52I1Q8NGK6 324 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 OR5AK2Q8NH90 309 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 OR2T6Q8NHC8 308 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 FOXRED1Q96CU9 486 aaPredicted RBP7.29□□□□□ -1.24
USF1-204ENST00000472217 MALSU1Q96EH3 234 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 MYCBPQ99417 103 aaPredicted RBP7.29□□□□□ -1.24
USF1-204ENST00000472217 PDCD1LG2Q9BQ51 273 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 KRTAP3-3Q9BYR6 98 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 KRTAP3-2Q9BYR7 98 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 COMMD4Q9H0A8 199 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 TMEM133Q9H2Q1 129 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 RANBP3Q9H6Z4 567 aaPredicted RBP7.29□□□□□ -1.24
USF1-204ENST00000472217 INPP5EQ9NRR6 644 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 GLS2Q9UI32 602 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 SESN1Q9Y6P5 492 aa7.29□□□□□ -1.24
USF1-204ENST00000472217 IGHV2-26A0A0B4J1V2 119 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 WBP4O75554 376 aaKnown RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 MMP23AO75900 390 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 ALX3O95076 343 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 CCDC159P0C7I6 412 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 LIMS3P0CW19 117 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 LIMS4P0CW20 117 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 JUNBP17275 347 aaPredicted RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 LMO1P25800 156 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 GLIPR1P48060 266 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 GTF2A1P52655 376 aaPredicted RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 GBX2P52951 348 aaPredicted RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 ZP1P60852 638 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 AESQ08117 197 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 IL18R1Q13478 541 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 KISS1Q15726 138 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 ZSCAN26Q16670 478 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 KLHL22Q53GT1 634 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 LPCAT4Q643R3 524 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 HIST2H2BDQ6DRA6 164 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 CCBE1Q6UXH8 406 aaPredicted RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 TMEM219Q86XT9 240 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 SERPINA12Q8IW75 414 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 PARP16Q8N5Y8 322 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 KLHDC1Q8N7A1 406 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 OR5D14Q8NGL3 314 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 RPS4Y2Q8TD47 263 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 TSEN15Q8WW01 171 aaKnown RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 RGP1Q92546 391 aaPredicted RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 NKX3-1Q99801 234 aaPredicted RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 JAM3Q9BX67 310 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 CLEC7AQ9BXN2 247 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 NPFFR1Q9GZQ6 430 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 ZNF702PQ9H963 129 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 RHOFQ9HBH0 211 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 ABCB10Q9NRK6 738 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 MRPS18AQ9NVS2 196 aaKnown RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 SMPD3Q9NY59 655 aaPredicted RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 FOXJ3Q9UPW0 622 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 DHDHQ9UQ10 334 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 TCF19Q9Y242 345 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 UBE2J1Q9Y385 318 aaPredicted RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 RPL36Q9Y3U8 105 aaKnown RBP7.28□□□□□ -1.24
USF1-204ENST00000472217 PCDHGB5Q9Y5G0 923 aa7.28□□□□□ -1.24
USF1-204ENST00000472217 TRGV10A0A0A0MS01 117 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 A0A0G2JK05 382 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 A6NDX4 124 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 F2RL2O00254 374 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 SLC33A1O00400 549 aaPredicted RBP7.27□□□□□ -1.25
USF1-204ENST00000472217 BAG2O95816 211 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 RPSAP08865 295 aaKnown RBP7.27□□□□□ -1.25
USF1-204ENST00000472217 TMEM225BP0DP42 221 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 ZNF44P15621 663 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 GDNFP39905 211 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 ETV1P50549 477 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 DYNLT3P51808 116 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 SCN1BQ07699 218 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 HABP2Q14520 560 aaPredicted RBP7.27□□□□□ -1.25
USF1-204ENST00000472217 ATXN7L3Q14CW9 347 aaPredicted RBP7.27□□□□□ -1.25
USF1-204ENST00000472217 HERPUD1Q15011 391 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 CDK5R1Q15078 307 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 C2orf68Q2NKX9 166 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 MINOS1Q5TGZ0 78 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 PRAMEF5Q5TYX0 476 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 ZNF691Q5VV52 312 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 DMRTA1Q5VZB9 504 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 XAF1Q6GPH4 301 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 ZNF529Q6P280 563 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 Q6P435 159 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 C11orf88Q6PI97 169 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 BAIAP2L2Q6UXY1 529 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 Q6ZTK2 550 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 C11orf44Q8N8P7 122 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 ZNF555Q8NEP9 628 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 OR51A2Q8NGJ7 313 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 OR4P4Q8NGL7 312 aa7.27□□□□□ -1.25
USF1-204ENST00000472217 NDNFQ8TB73 568 aa7.27□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms