RNA–Protein interactions for RNA: ENST00000471744.1

SNX13-205, Transcript of sorting nexin 13, humanhuman

TSL 4

Gene SNX13, Length 454 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-205ENST00000471744 AWAT2Q6E213 333 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 LINC00596Q86U02 117 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 LRRTM1Q86UE6 522 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 CMTM4Q8IZR5 234 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 OR8H2Q8N162 312 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 KIR3DL3Q8N743 410 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 LY6G5BQ8NDX9 201 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 MUL1Q969V5 352 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 MRPS24Q96EL2 167 aaKnown RBP12.5□□□□□ -0.41
SNX13-205ENST00000471744 NR1H4Q96RI1 486 aaPredicted RBP12.5□□□□□ -0.41
SNX13-205ENST00000471744 CNTD2Q9H8S5 307 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 OPN4Q9UHM6 478 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 KPTNQ9Y664 436 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 KIAA2026Q5HYC2 2103 aa12.5□□□□□ -0.41
SNX13-205ENST00000471744 A0A1W2PQ09 198 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 CDRT1O95170 752 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 HTR3BO95264 441 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 UBBP0CG47 229 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 GTF2F2P13984 249 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 ZNF44P15621 663 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 LMO1P25800 156 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 CALRP27797 417 aaKnown RBP12.49□□□□□ -0.41
SNX13-205ENST00000471744 NEDD8Q15843 81 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 METTL11BQ5VVY1 283 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 DMRTA1Q5VZB9 504 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 GDPD3Q7L5L3 318 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 LYPD6Q86Y78 171 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 OSR2Q8N2R0 312 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 UPRTQ96BW1 309 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 IL36RNQ9UBH0 155 aa12.49□□□□□ -0.41
SNX13-205ENST00000471744 NF1P21359 2839 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 TRAV1-2A0A0B4J238 106 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 FUOMA2VDF0 154 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 PDCD5O14737 125 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 MGST3O14880 152 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 DEGS1O15121 323 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 OR2H2O95918 312 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 AVPP01185 164 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 IFNA2P01563 188 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 CD37P11049 281 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 ADRA2CP18825 462 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 SERPINA2P20848 420 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 GABRR1P24046 479 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 MYL9P24844 172 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 DUSP1P28562 367 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 SNU13P55769 128 aaKnown RBP12.48□□□□□ -0.41
SNX13-205ENST00000471744 RPL31P62899 125 aaKnown RBP12.48□□□□□ -0.41
SNX13-205ENST00000471744 BLMHQ13867 455 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 SLC22A6Q4U2R8 563 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 C1orf100Q5SVJ3 147 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 GLIPR1L1Q6UWM5 242 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 C1orf229Q6ZS94 237 aaPredicted RBP12.48□□□□□ -0.41
SNX13-205ENST00000471744 C1orf122Q6ZSJ8 110 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 IL17RELQ6ZVW7 336 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 FGFRL1Q8N441 504 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 PPIL3Q9H2H8 161 aaKnown RBP12.48□□□□□ -0.41
SNX13-205ENST00000471744 STUB1Q9UNE7 303 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 SSR3Q9UNL2 185 aa12.48□□□□□ -0.41
SNX13-205ENST00000471744 NIPBLQ6KC79 2804 aaeCLIP12.48□□□□□ -0.41
SNX13-205ENST00000471744 TMEM82A0PJX8 343 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 H3BUI4 141 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 M0R1W7 72 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 SIRPB1O00241 398 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 TOX4O94842 621 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 CSN2P05814 226 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 CALCBP10092 127 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 HOXB4P17483 251 aaPredicted RBP12.47□□□□□ -0.41
SNX13-205ENST00000471744 ERP29P30040 261 aaKnown RBP12.47□□□□□ -0.41
SNX13-205ENST00000471744 FGF9P31371 208 aaPredicted RBP12.47□□□□□ -0.41
SNX13-205ENST00000471744 RBM11P57052 281 aaKnown RBP12.47□□□□□ -0.41
SNX13-205ENST00000471744 PDCD1Q15116 288 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 GRK1Q15835 563 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 MPV17LQ2QL34 196 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 Q6P435 159 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 C17orf107Q6ZR85 190 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 OR4D6Q8NGJ1 314 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 OR6M1Q8NGM8 313 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 OR10K1Q8NGX5 313 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 POM121Q96HA1 1249 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 WDFY2Q96P53 400 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 NKX3-1Q99801 234 aaPredicted RBP12.47□□□□□ -0.41
SNX13-205ENST00000471744 CST11Q9H112 138 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 IFT22Q9H7X7 185 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 ONECUT1Q9UBC0 465 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 ST3GAL6Q9Y274 331 aa12.47□□□□□ -0.41
SNX13-205ENST00000471744 hCG_1809904A0A1W2PP81 198 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 A0A1W2PPE2 198 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 A0A1W2PR64 198 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 A0A1W2PRV1 198 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 TRIM64CA6NLI5 447 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 PSPNO60542 156 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 FSHBP01225 129 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 HTR2CP28335 458 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 KCNJ3P48549 501 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 BPIFB3P59826 476 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 ARF6P62330 175 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 MEF2CQ06413 473 aaPredicted RBP12.46□□□□□ -0.41
SNX13-205ENST00000471744 SCN1BQ07699 218 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 TIMM50Q3ZCQ8 353 aa12.46□□□□□ -0.41
SNX13-205ENST00000471744 FAM185AQ8N0U4 392 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms