RNA–Protein interactions for RNA: ENST00000471702.2

NPHP3-ACAD11-201, Transcript of NPHP3-ACAD11 readthrough (NMD candidate), humanhuman

TSL 2 BASIC

Gene NPHP3-ACAD11, Length 7,784 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-ACAD11-201ENST00000471702 IGFBP6P24592 240 aaPredicted RBP11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CEACAM3P40198 252 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GNG4P50150 75 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF774Q6NX45 483 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 C6orf201Q7Z4U5 140 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 LRRC29Q8WV35 223 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TMEM18Q96B42 140 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF768Q9H5H4 540 aaKnown RBP11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 UPK1AO00322 258 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SCARB1Q8WTV0 552 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 VGLL1Q99990 258 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PARD6AQ9NPB6 346 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 KLK11Q9UBX7 282 aa11.83□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 A0A1W2PN81 502 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CHRNA7P36544 502 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 AFMIDQ63HM1 303 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 NANOGP1Q8N7R0 232 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 RICTORQ6R327 1708 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TIAL1Q01085 375 aaKnown RBP eCLIP11.82□□□□□ -0.523e-6■■□□□ 11.7
NPHP3-ACAD11-201ENST00000471702 FMODQ06828 376 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FBLL1A6NHQ2 334 aaKnown RBP11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GNG7O60262 68 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GPR3P46089 330 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FGF8P55075 233 aaPredicted RBP11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PDCD11Q14690 1871 aaKnown RBP11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TMEM211Q6ICI0 200 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 KIRREL2Q6UWL6 708 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 AUNIPQ9H7T9 357 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SAP30LQ9HAJ7 183 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 DDX60Q8IY21 1712 aaKnown RBP11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CCL21O00585 134 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SBK3P0C264 359 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PJVKQ0ZLH3 352 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GGTLC2Q14390 218 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR10D3Q8NH80 312 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MED12LQ86YW9 2145 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 DHRS7CA6NNS2 312 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PRF1P14222 555 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PGFP49763 221 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CCR5P51681 352 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 MRGPREQ86SM8 312 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 UBE2DNLQ8IWF7 75 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GATA6Q92908 595 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PLEKHA2Q9HB19 425 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TRAV20A0A0B4J274 112 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CGB1A6NKQ9 187 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 RAF1P04049 648 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SNRPCP09234 159 aaKnown RBP11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CD37P11049 281 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GABRG2P18507 467 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 B2MP61769 119 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 WDR88Q6ZMY6 472 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF502Q8TBZ5 544 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 EID2BQ96D98 161 aa11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 RPP25Q9BUL9 199 aaKnown RBP11.82□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 A0A087WUJ7 227 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SMIM19Q96E16 107 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FZD5Q13467 585 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 RNPS1Q15287 305 aaKnown RBP11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR4C13Q8NGP0 309 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 JAM3Q9BX67 310 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR6C3Q9NZP0 311 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 IGHV5-51A0A0C4DH38 117 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FRG2CA6NGY1 282 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 RANP62826 216 aaKnown RBP11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ACER2Q5QJU3 275 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CD276Q5ZPR3 534 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 LRP12Q9Y561 859 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CCR2P41597 374 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FAM53BQ14153 422 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TMEM215Q68D42 235 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PHYHIPQ92561 330 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF426Q9BUY5 554 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 RTN4RQ9BZR6 473 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 DOCK4Q8N1I0 1966 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 EML2O95834 649 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 LALBAP00709 142 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 SP1P08047 785 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FOXO1Q12778 655 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 AQP6Q13520 282 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 COPS9Q8WXC6 57 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FKBP11Q9NYL4 201 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 A0A1B0GUL6 1792 aa11.81□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 FABP5Q01469 135 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 EBLN2Q6P2I7 272 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 WDR89Q96FK6 387 aaPredicted RBP11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 GCAP28676 217 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR8B3Q8NGG8 313 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 APOBEC4Q8WW27 367 aaKnown RBP11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 OR8B2Q96RD0 313 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 INSIG2Q9Y5U4 225 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 PPM1DO15297 605 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF66Q6ZN08 573 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 ZNF547Q8IVP9 402 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 CACFD1Q9UGQ2 172 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 IFITM5A6NNB3 132 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 TAAR5O14804 337 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 HTN3P15516 51 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 B3GNT9Q6UX72 402 aa11.8□□□□□ -0.52
NPHP3-ACAD11-201ENST00000471702 LOC107984156A0A0G2JMH3 177 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 60.5 ms