RNA–Protein interactions for RNA: ENST00000471372.1

SMC5-202, Transcript of structural maintenance of chromosomes 5, humanhuman

TSL 3

Gene SMC5, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-202ENST00000471372 C2orf73Q8N5S3 287 aaPredicted RBP4.17□□□□□ -1.74
SMC5-202ENST00000471372 TMEM156Q8N614 296 aa4.17□□□□□ -1.74
SMC5-202ENST00000471372 GATD1Q8NB37 220 aa4.17□□□□□ -1.74
SMC5-202ENST00000471372 OR2Z1Q8NG97 314 aa4.17□□□□□ -1.74
SMC5-202ENST00000471372 L3HYPDHQ96EM0 354 aa4.17□□□□□ -1.74
SMC5-202ENST00000471372 DERL3Q96Q80 235 aa4.17□□□□□ -1.74
SMC5-202ENST00000471372 FBXO6Q9NRD1 293 aaPredicted RBP4.17□□□□□ -1.74
SMC5-202ENST00000471372 PTPRTO14522 1441 aa4.17□□□□□ -1.74
SMC5-202ENST00000471372 TRAV8-2A0A0B4J237 113 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 MYBPHLA2RUH7 354 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 PGPA6NDG6 321 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 COX7A2P2O60397 106 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 CRTAPO75718 401 aaPredicted RBP4.16□□□□□ -1.74
SMC5-202ENST00000471372 CYB5R3P00387 301 aaPredicted RBP4.16□□□□□ -1.74
SMC5-202ENST00000471372 MAS1P04201 325 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 CECR9P0C854 216 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 CD28P10747 220 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 NELFEP18615 380 aaKnown RBP4.16□□□□□ -1.74
SMC5-202ENST00000471372 TGFBR1P36897 503 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 RAB25P57735 213 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 DYNLL1P63167 89 aaKnown RBP4.16□□□□□ -1.74
SMC5-202ENST00000471372 ITGB3BPQ13352 177 aaPredicted RBP4.16□□□□□ -1.74
SMC5-202ENST00000471372 PTGES3Q15185 160 aaKnown RBP4.16□□□□□ -1.74
SMC5-202ENST00000471372 ELOCQ15369 112 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 UBE2NLQ5JXB2 153 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 ZNF101Q8IZC7 436 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 TMEM251Q8N6I4 163 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 API5Q9BZZ5 524 aaKnown RBP4.16□□□□□ -1.74
SMC5-202ENST00000471372 ZNF436Q9C0F3 470 aaPredicted RBP4.16□□□□□ -1.74
SMC5-202ENST00000471372 OR51E2Q9H255 320 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 VCXQ9H320 206 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 COMMD9Q9P000 198 aa4.16□□□□□ -1.74
SMC5-202ENST00000471372 AHDC1Q5TGY3 1603 aaPredicted RBP4.15□□□□□ -1.74
SMC5-202ENST00000471372 TRAV8-3A0A0A6YYJ7 113 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 CENPVL3A0A0U1RRI6 287 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 C8orf87E5RJ46 101 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 F5H5K5 113 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 HPGDSO60760 199 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 CA2P00918 260 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 ASS1P00966 412 aaKnown RBP4.15□□□□□ -1.75
SMC5-202ENST00000471372 IL1RNP18510 177 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 PRTN3P24158 256 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 CDC20Q12834 499 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 MED21Q13503 144 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 TBC1D28Q2M2D7 210 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 CASP12Q6UXS9 341 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 ENTHD1Q8IYW4 607 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 SAXO1Q8IYX7 474 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 RIBC1Q8N443 379 aaPredicted RBP4.15□□□□□ -1.75
SMC5-202ENST00000471372 Q8N7P7 452 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 DNAAF3Q8N9W5 541 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 ZNF555Q8NEP9 628 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 UBALD1Q8TB05 177 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 C17orf50Q8WW18 174 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 RNF157Q96PX1 679 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 RNF5Q99942 180 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 MS4A8Q9BY19 250 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 PARD6GQ9BYG4 376 aaPredicted RBP4.15□□□□□ -1.75
SMC5-202ENST00000471372 ZNF780BQ9Y6R6 833 aa4.15□□□□□ -1.75
SMC5-202ENST00000471372 FAM183AA6NL82 134 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 CEACAM18A8MTB9 384 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 PSMG1O95456 288 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 EPPINO95925 133 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 HLA-AP01891 365 aaKnown RBP4.14□□□□□ -1.75
SMC5-202ENST00000471372 COX5BP10606 129 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 F8A1P23610 371 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 ZNF235Q14590 738 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 C4orf26Q17RF5 130 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 FAM162BQ5T6X4 162 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 Q6P435 159 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 MORN3Q6PF18 240 aaPredicted RBP4.14□□□□□ -1.75
SMC5-202ENST00000471372 KRTAP11-1Q8IUC1 163 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 ZNF565Q8N9K5 539 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 ESR2Q92731 530 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 CMTM5Q96DZ9 223 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 GPR82Q96P67 336 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 RBP7Q96R05 134 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 ANAPC13Q9BS18 74 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 SPZ1Q9BXG8 430 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 CBY1Q9Y3M2 126 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 VWA8A3KMH1 1905 aa4.14□□□□□ -1.75
SMC5-202ENST00000471372 IGHV1-3A0A0C4DH29 117 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 LGALS9O00182 355 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 DEXIO95424 95 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 ATF1P18846 271 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 IMPA1P29218 277 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 FAM3AP98173 230 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 SP6Q3SY56 376 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 KLHL12Q53G59 568 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 GLYATQ6IB77 296 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 ZNF773Q6PK81 442 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 FA2HQ7L5A8 372 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 PAGE2Q7Z2X7 111 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 ZNF695Q8IW36 515 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 UBALD2Q8IYN6 164 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 Q8N9L7 120 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 C8orf76Q96K31 380 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 MBOAT7Q96N66 472 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 RFNGQ9Y644 331 aa4.13□□□□□ -1.75
SMC5-202ENST00000471372 RAB3GAP2Q9H2M9 1393 aa4.13□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms