RNA–Protein interactions for RNA: ENST00000471344.1

COL1A1-203, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 1,192 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-203ENST00000471344 PRAMEF5Q5TYX0 476 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 C1QL4Q86Z23 238 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 Q8IYB0 196 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 KLHDC1Q8N7A1 406 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 OR11H6Q8NGC7 330 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 OR52I1Q8NGK6 324 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 NRG4Q8WWG1 115 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 PDCD1LG2Q9BQ51 273 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 ZNF702PQ9H963 129 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 FAM118AQ9NWS6 357 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 ERVK13-1Q9NX77 482 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 LINC00312Q9Y6C7 94 aa12.39□□□□□ -0.43
COL1A1-203ENST00000471344 IGHV2-26A0A0B4J1V2 119 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 LOC100130705A0A1B0GUX0 176 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 hADV38S2A0JD32 116 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 FAM172BPA6NC97 362 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 VGLL3A8MV65 326 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 MPZL2O60487 215 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 KDM4BO94953 1096 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 CYB5AP00167 134 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 GDNFP39905 211 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 KIR2DS4P43632 304 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 GTF2A1P52655 376 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-203ENST00000471344 P2RX3P56373 397 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 IL18R1Q13478 541 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 FBLN7Q53RD9 439 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 UTF1Q5T230 341 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 OGFRL1Q5TC84 451 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-203ENST00000471344 LYG1Q8N1E2 194 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 RGP1Q92546 391 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-203ENST00000471344 MYCBPQ99417 103 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-203ENST00000471344 ZCCHC4Q9H5U6 513 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 SEBOXQ9HB31 216 aaPredicted RBP12.38□□□□□ -0.43
COL1A1-203ENST00000471344 NEK6Q9HC98 313 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 ING3Q9NXR8 418 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 TCF19Q9Y242 345 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 TBL2Q9Y4P3 447 aaKnown RBP12.38□□□□□ -0.43
COL1A1-203ENST00000471344 HILPDAQ9Y5L2 63 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 SESN1Q9Y6P5 492 aa12.38□□□□□ -0.43
COL1A1-203ENST00000471344 A6NDX4 124 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 MGST3O14880 152 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 CASQ2O14958 399 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-203ENST00000471344 MT-ND2P03891 347 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 OCM2P0CE71 109 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 OCMP0CE72 109 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-203ENST00000471344 VSIG10L2P0DP72 767 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 GLIPR1P48060 266 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 ZP1P60852 638 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 SCN1BQ07699 218 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 AESQ08117 197 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 SPIN3Q5JUX0 258 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 XAF1Q6GPH4 301 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 Q6ZS46 218 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 TRAPPC6BQ86SZ2 158 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 SYS1Q8N2H4 156 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 FOXRED1Q96CU9 486 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-203ENST00000471344 MRPL48Q96GC5 212 aaKnown RBP12.37□□□□□ -0.43
COL1A1-203ENST00000471344 TMEM133Q9H2Q1 129 aa12.37□□□□□ -0.43
COL1A1-203ENST00000471344 RANBP3Q9H6Z4 567 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-203ENST00000471344 EXOSC4Q9NPD3 245 aaKnown RBP12.37□□□□□ -0.43
COL1A1-203ENST00000471344 SMPD3Q9NY59 655 aaPredicted RBP12.37□□□□□ -0.43
COL1A1-203ENST00000471344 WBP4O75554 376 aaKnown RBP12.36□□□□□ -0.43
COL1A1-203ENST00000471344 HCKP08631 526 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 LIMS3P0CW19 117 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 LIMS4P0CW20 117 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 HERPUD1Q15011 391 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 CDK5R1Q15078 307 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 C2orf68Q2NKX9 166 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 TMEM95Q3KNT9 176 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 Q6P435 159 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 OR51A2Q8NGJ7 313 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 OR4P4Q8NGL7 312 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 OR2T6Q8NHC8 308 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 MALSU1Q96EH3 234 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 COQ2Q96H96 371 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 Q96MT0 163 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 NPFFR1Q9GZQ6 430 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 COMMD4Q9H0A8 199 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 PPIL3Q9H2H8 161 aaKnown RBP12.36□□□□□ -0.43
COL1A1-203ENST00000471344 RAB18Q9NP72 206 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 SERTAD4Q9NUC0 356 aa12.36□□□□□ -0.43
COL1A1-203ENST00000471344 KIAA2026Q5HYC2 2103 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 A0A0G2JK05 382 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 HSPB6O14558 160 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 SH2D1BO14796 132 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 SULT1B1O43704 296 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 FADS2O95864 444 aaKnown RBP12.35□□□□□ -0.43
COL1A1-203ENST00000471344 RPSAP08865 295 aaKnown RBP12.35□□□□□ -0.43
COL1A1-203ENST00000471344 GNAO1P09471 354 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 CSF1P09603 554 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 ZNF44P15621 663 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 CD24P25063 80 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 SOX2P48431 317 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 ADARB1P78563 741 aaKnown RBP12.35□□□□□ -0.43
COL1A1-203ENST00000471344 SLC34A1Q06495 639 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 RAB40BQ12829 278 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 ATXN7L3Q14CW9 347 aaPredicted RBP12.35□□□□□ -0.43
COL1A1-203ENST00000471344 KISS1Q15726 138 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 LIAT1Q6ZQX7 453 aa12.35□□□□□ -0.43
COL1A1-203ENST00000471344 Q6ZTK2 550 aa12.35□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 294.6 ms