RNA–Protein interactions for RNA: ENST00000470167.1

COL3A1-205, Transcript of collagen type III alpha 1 chain, humanhuman

TSL 2

Gene COL3A1, Length 628 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1-205ENST00000470167 CRYAAP02489 173 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ATF1P18846 271 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 MALP21145 153 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 NTSP30990 170 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 SDC2P34741 201 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 DCTP40126 519 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 SOX3P41225 446 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 IER3P46695 156 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 STC1P52823 247 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 FOXA1P55317 472 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 TCL1AP56279 114 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 RPS25P62851 125 aaKnown RBP4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ARG2P78540 354 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 RTP5Q14D33 572 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 PAFAH1B3Q15102 231 aaKnown RBP4.43□□□□□ -1.7
COL3A1-205ENST00000470167 MMDQ15546 238 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 C3AR1Q16581 482 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 LRRC75BQ2VPJ9 315 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM196Q5HYL7 178 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 LY6G6FQ5SQ64 297 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 LYPLAL1Q5VWZ2 237 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 LYSMD4Q5XG99 296 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM200BQ69YZ2 307 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 AADACL2Q6P093 401 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF343Q6P1L6 599 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 BTNL8Q6UX41 500 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF595Q8IYB9 648 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 BLIDQ8IZY5 108 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 KIR3DL3Q8N743 410 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 STPG3Q8N7X2 389 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 COX18Q8N8Q8 333 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ABHD5Q8WTS1 349 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 PP6455Q8WZ26 134 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 OR5P2Q8WZ92 322 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 FAM168AQ92567 244 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 SLC25A46Q96AG3 418 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 DIRAS2Q96HU8 199 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 MACROD1Q9BQ69 325 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ANAPC13Q9BS18 74 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 IFI27L2Q9H2X8 130 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 CDH20Q9HBT6 801 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ENY2Q9NPA8 101 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 B3GAT2Q9NPZ5 323 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 ALKBH4Q9NXW9 302 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 THYN1Q9P016 225 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 JKAMPQ9P055 326 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 FTSJ1Q9UET6 329 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 TESQ9UGI8 421 aaKnown RBP4.43□□□□□ -1.7
COL3A1-205ENST00000470167 SHPKQ9UHJ6 478 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 FUT9Q9Y231 359 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 LRP6O75581 1613 aa4.43□□□□□ -1.7
COL3A1-205ENST00000470167 MROH2AA6NES4 1674 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 KIF13BQ9NQT8 1826 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 A0A087X0T9 212 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM235A6NFC5 223 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 FOXI3A8MTJ6 420 aaPredicted RBP4.42□□□□□ -1.7
COL3A1-205ENST00000470167 E7EQ34 232 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 H3BQ15 152 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 K7EPK0 472 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 GABRPO00591 440 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 NKX2-8O15522 239 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 MLNRO43193 412 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF207O43670 478 aaKnown RBP4.42□□□□□ -1.7
COL3A1-205ENST00000470167 OR7C1O76099 320 aaPredicted RBP4.42□□□□□ -1.7
COL3A1-205ENST00000470167 TOXO94900 526 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 MOSP00540 346 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 IL5P05113 134 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 CT62P0C5K7 136 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ANKRD34CP0C6C1 535 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF43P17038 809 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 PRKACGP22612 351 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 PRTN3P24158 256 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 CTRLP40313 264 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 GPR1P46091 355 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 GYG1P46976 350 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 CXCL12P48061 93 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 INPP1P49441 399 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 CCL11P51671 97 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 GPM6AP51674 278 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 CRISP3P54108 245 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 CRADDP78560 199 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ACSM2AQ08AH3 577 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 SLC10A2Q12908 348 aaPredicted RBP4.42□□□□□ -1.7
COL3A1-205ENST00000470167 HIST3H3Q16695 136 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 MST1LQ2TV78 715 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ACTL10Q5JWF8 245 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 DCST2Q5T1A1 773 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ACSM2BQ68CK6 577 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 GLIPR1L1Q6UWM5 242 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 TMEM184AQ6ZMB5 413 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF788Q6ZQV5 615 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 LRRC55Q6ZSA7 311 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 PRRT2Q7Z6L0 340 aaPredicted RBP4.42□□□□□ -1.7
COL3A1-205ENST00000470167 SAMD9LQ8IVG5 1584 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF547Q8IVP9 402 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 STHQ8IWL8 128 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 SLC39A11Q8N1S5 342 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 FAM71E2Q8N5Q1 922 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF611Q8N823 705 aa4.42□□□□□ -1.7
COL3A1-205ENST00000470167 ZNF485Q8NCK3 441 aa4.42□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 31.8 ms