RNA–Protein interactions for RNA: ENST00000468602.5

MSH5-214, Transcript of mutS homolog 5, humanhuman

TSL 3

Gene MSH5, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-214ENST00000468602 IGHV2-5P01817 119 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 APOA1P02647 267 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 PRKACAP17612 351 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 PRDX2P32119 198 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 MNDAP41218 407 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 FAM201AQ5SY85 155 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 SIGIRRQ6IA17 410 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 RAB12Q6IQ22 244 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 CD177Q8N6Q3 437 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 OR5D13Q8NGL4 314 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 C8orf46Q8TAG6 207 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 DACT3Q96B18 629 aaPredicted RBP9.39□□□□□ -0.91
MSH5-214ENST00000468602 SNX22Q96L94 193 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 WDFY2Q96P53 400 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 GAFA1Q96PS6 74 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 SHARPINQ9H0F6 387 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 MMP27Q9H306 513 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 RABL2AQ9UBK7 228 aaPredicted RBP9.39□□□□□ -0.91
MSH5-214ENST00000468602 DNAJB11Q9UBS4 358 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 RABL2BQ9UNT1 228 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 MAB21L2Q9Y586 359 aa9.39□□□□□ -0.91
MSH5-214ENST00000468602 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.39□□□□□ -0.912e-12■■■■□ 25.3
MSH5-214ENST00000468602 A0A1W2PP11 408 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 METTL21EPA6NDL7 271 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 CRTAPO75718 401 aaPredicted RBP9.38□□□□□ -0.91
MSH5-214ENST00000468602 HTR3BO95264 441 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 OR2H2O95918 312 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 PLATP00750 562 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 SERPINA2P20848 420 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 FUT3P21217 361 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 USF1P22415 310 aaPredicted RBP9.38□□□□□ -0.91
MSH5-214ENST00000468602 CD80P33681 288 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 CLDN12P56749 244 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 IL13RA1P78552 427 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 P2RY14Q15391 338 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 CR1LQ2VPA4 569 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 UBE2NLQ5JXB2 153 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 IDNKQ5T6J7 187 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 MZT2AQ6P582 158 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 C17orf107Q6ZR85 190 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 OR56B1Q8NGI3 324 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 CLDND2Q8NHS1 167 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 LGALS14Q8TCE9 139 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 RAB39BQ96DA2 213 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 SLC25A38Q96DW6 304 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 SEH1LQ96EE3 360 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 NEIL1Q96FI4 390 aaPredicted RBP9.38□□□□□ -0.91
MSH5-214ENST00000468602 NKX3-1Q99801 234 aaPredicted RBP9.38□□□□□ -0.91
MSH5-214ENST00000468602 RHBDL2Q9NX52 303 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 CELSR1Q9NYQ6 3014 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 DSCAML1Q8TD84 2053 aa9.38□□□□□ -0.91
MSH5-214ENST00000468602 MED13LQ71F56 2210 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 AKAP9Q99996 3911 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 TRBV6-6A0A0A6YYG2 114 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 TRAV24A0A0B4J272 114 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 C3orf80F5H4A9 247 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 SLC33A1O00400 549 aaPredicted RBP9.37□□□□□ -0.91
MSH5-214ENST00000468602 GEMIN2O14893 280 aaKnown RBP9.37□□□□□ -0.91
MSH5-214ENST00000468602 PDCD6O75340 191 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 FCN3O75636 299 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 MPIG6BO95866 241 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 ECDO95905 644 aaPredicted RBP9.37□□□□□ -0.91
MSH5-214ENST00000468602 PAHP00439 452 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 TK1P04183 234 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 MELTFP08582 738 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 SNRPBP14678 240 aaKnown RBP9.37□□□□□ -0.91
MSH5-214ENST00000468602 CHATP28329 748 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 ART1P52961 327 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 TMEM50BP56557 158 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 PAX2Q02962 417 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 PIGYQ3MUY2 71 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 SFRP4Q6FHJ7 346 aaPredicted RBP9.37□□□□□ -0.91
MSH5-214ENST00000468602 NLRC3Q7RTR2 1065 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 BIVMQ86UB2 503 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 OR8H2Q8N162 312 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 OR5H6Q8NGV6 325 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 OR10K1Q8NGX5 313 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 PPP1R35Q8TAP8 253 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 REG4Q9BYZ8 158 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 SELENOIQ9C0D9 397 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 IL36RNQ9UBH0 155 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 CTSZQ9UBR2 303 aa9.37□□□□□ -0.91
MSH5-214ENST00000468602 TRBV23-1A0A0A0MS06 115 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 A0A0A6YYD4 124 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 IGHV4-61A0A0C4DH41 118 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 TMEM82A0PJX8 343 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 CCDC160A6NGH7 325 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 NKX6-3A6NJ46 265 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 SERPINE3A8MV23 424 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 MGST3O14880 152 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 DEGS1O15121 323 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 XRCC3O43542 346 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 PSPNO60542 156 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 GYPAP02724 150 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 HEXAP06865 529 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 ETV6P41212 452 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 EFNB2P52799 333 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 HOXA4Q00056 320 aaPredicted RBP9.36□□□□□ -0.91
MSH5-214ENST00000468602 COL10A1Q03692 680 aa9.36□□□□□ -0.91
MSH5-214ENST00000468602 RBM39Q14498 530 aaKnown RBP9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms