RNA–Protein interactions for RNA: ENST00000468338.5

COL4A6-205, Transcript of collagen type IV alpha 6 chain, humanhuman

TSL 5

Gene COL4A6, Length 865 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A6-205ENST00000468338 TMEM200BQ69YZ2 307 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 DMKNQ6E0U4 476 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-205ENST00000468338 HCP5Q6MZN7 132 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 C17orf107Q6ZR85 190 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 LDLRAD3Q86YD5 345 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 SAXO1Q8IYX7 474 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 FAM58AQ8N1B3 248 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 TMEM86BQ8N661 226 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 ZSCAN4Q8NAM6 433 aaPredicted RBP9.12□□□□□ -0.95
COL4A6-205ENST00000468338 OR5D14Q8NGL3 314 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 OR13C9Q8NGT0 318 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 TBC1D15Q8TC07 691 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 NRG4Q8WWG1 115 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 SMIM19Q96E16 107 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 COMMD4Q9H0A8 199 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 METTL8Q9H825 291 aaKnown RBP9.12□□□□□ -0.95
COL4A6-205ENST00000468338 RHOFQ9HBH0 211 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 SIRT7Q9NRC8 400 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 PSORS1C1Q9UIG5 152 aa9.12□□□□□ -0.95
COL4A6-205ENST00000468338 TENM1Q9UKZ4 2725 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 EFCAB10A6NFE3 127 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 SPRY1O43609 319 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-205ENST00000468338 SULT1B1O43704 296 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 XPNPEP2O43895 674 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 MELTFP08582 738 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 MYL12AP19105 171 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 BCL3P20749 454 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 LMO1P25800 156 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 POU3F4P49335 361 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 UBE2E1P51965 193 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 DLX1P56177 255 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 DLX6P56179 175 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 COL10A1Q03692 680 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 KISS1Q15726 138 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 SPIN3Q5JUX0 258 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 RNLSQ5VYX0 342 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 STEAP3Q658P3 488 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 NCR3LG1Q68D85 454 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 C16orf87Q6PH81 154 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 OR8H2Q8N162 312 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 Q8NFD4 153 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 OR5D13Q8NGL4 314 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 GPR148Q8TDV2 347 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 GCDHQ92947 438 aaPredicted RBP9.11□□□□□ -0.95
COL4A6-205ENST00000468338 SLC25A28Q96A46 364 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 SNX22Q96L94 193 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 DUX5Q96PT3 197 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 SPACA5Q96QH8 159 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 VCXQ9H320 206 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 NEK6Q9HC98 313 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 HMG20AQ9NP66 347 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 RBFOX1Q9NWB1 397 aaKnown RBP9.11□□□□□ -0.95
COL4A6-205ENST00000468338 IL36RNQ9UBH0 155 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 OR14J1Q9UGF5 321 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 DHDHQ9UQ10 334 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 POMT1Q9Y6A1 747 aa9.11□□□□□ -0.95
COL4A6-205ENST00000468338 TRBV5-5A0A0J9YX44 114 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 A0A0U1RQK1 487 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 A0A1W2PQ09 198 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 C17orf98A8MV24 154 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 HOXA3O43365 443 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-205ENST00000468338 ANGPTL7O43827 346 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 PSPNO60542 156 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 HAND1O96004 215 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 CYB5AP00167 134 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 ALDOBP05062 364 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 C21orf33P30042 268 aaPredicted RBP9.1□□□□□ -0.95
COL4A6-205ENST00000468338 CAPZA1P52907 286 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 RPS11P62280 158 aaKnown RBP eCLIP9.1□□□□□ -0.95
COL4A6-205ENST00000468338 ACTG1P63261 375 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 ACSM1Q08AH1 577 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 BLMHQ13867 455 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 ZNF273Q14593 569 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 AWAT1Q58HT5 328 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 ASCL4Q6XD76 172 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 FAM185AQ8N0U4 392 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 PXT1Q8NFP0 134 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 OR52N4Q8NGI2 321 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 OR51A2Q8NGJ7 313 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 EMG1Q92979 244 aaKnown RBP9.1□□□□□ -0.95
COL4A6-205ENST00000468338 AJUBAQ96IF1 538 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 PGLYRP3Q96LB9 341 aa9.1□□□□□ -0.95
COL4A6-205ENST00000468338 CHCHD3Q9NX63 227 aaKnown RBP9.1□□□□□ -0.95
COL4A6-205ENST00000468338 A0A1W2PPH5 198 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 NPFFO15130 113 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 GPX5O75715 221 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 RBP4P02753 201 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 CD1AP06126 327 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 CD2P06729 351 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 RAB3AP20336 220 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 ERP29P30040 261 aaKnown RBP9.09□□□□□ -0.95
COL4A6-205ENST00000468338 IER3P46695 156 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 SOX2P48431 317 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 PRB3Q04118 309 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-205ENST00000468338 MEF2CQ06413 473 aaPredicted RBP9.09□□□□□ -0.95
COL4A6-205ENST00000468338 FOXL1Q12952 345 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 KLRD1Q13241 179 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 MED21Q13503 144 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 DOC2BQ14184 412 aa9.09□□□□□ -0.95
COL4A6-205ENST00000468338 C6orf141Q5SZD1 244 aa9.09□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 112.5 ms