RNA–Protein interactions for RNA: ENST00000468300.5

BRCA1-208, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best) BASIC

Gene BRCA1, Length 3,273 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-208ENST00000468300 RBP2P50120 134 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 PDZK1IP1Q13113 114 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 RNASE12Q5GAN4 147 aaKnown RBP7.04□□□□□ -1.28
BRCA1-208ENST00000468300 MBNL2Q5VZF2 373 aaKnown RBP7.04□□□□□ -1.28
BRCA1-208ENST00000468300 PLCXD3Q63HM9 321 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 SMIM15Q7Z3B0 74 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 ACBD4Q8NC06 268 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 RNF170Q96K19 258 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 TECTBQ96PL2 329 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 TM2D1Q9BX74 207 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 CDH20Q9HBT6 801 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 HCFC1P51610 2035 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 MLNRO43193 412 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 KCNAB3O43448 404 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 ADAP1O75689 374 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 MELTFP08582 738 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 NQO2P16083 231 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 CEBPDP49716 269 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-208ENST00000468300 GPM6AP51674 278 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 RPS27AP62979 156 aaKnown RBP7.04□□□□□ -1.28
BRCA1-208ENST00000468300 PITPNAQ00169 270 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 SCN1BQ07699 218 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 ATPAF1Q5TC12 328 aaPredicted RBP7.04□□□□□ -1.28
BRCA1-208ENST00000468300 OR5L1Q8NGL2 311 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 TNFAIP8L1Q8WVP5 186 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 SEH1LQ96EE3 360 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF251Q9BRH9 671 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 ZMAT3Q9HA38 289 aaKnown RBP7.04□□□□□ -1.28
BRCA1-208ENST00000468300 IL36GQ9NZH8 169 aa7.04□□□□□ -1.28
BRCA1-208ENST00000468300 MRPL15Q9P015 296 aaKnown RBP7.04□□□□□ -1.28
BRCA1-208ENST00000468300 TRAV18A0A075B6X5 111 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 KITLGP21583 273 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 CA6P23280 308 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 GRNP28799 593 aaKnown RBP7.03□□□□□ -1.28
BRCA1-208ENST00000468300 NPBWR2P48146 333 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 RAB13P51153 203 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 MOGAT3Q86VF5 341 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 LRP11Q86VZ4 500 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 ZDHHC23Q8IYP9 409 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 CSNK2A3Q8NEV1 391 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 STEAP2Q8NFT2 490 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 GPX8Q8TED1 209 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 C22orf15Q8WYQ4 148 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 DPF1Q92782 380 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 ZC3HAV1LQ96H79 300 aaKnown RBP7.03□□□□□ -1.28
BRCA1-208ENST00000468300 GHRLQ9UBU3 117 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 HRNRQ86YZ3 2850 aaPredicted RBP7.03□□□□□ -1.28
BRCA1-208ENST00000468300 MAP1BP46821 2468 aaKnown RBP7.03□□□□□ -1.28
BRCA1-208ENST00000468300 A0A0A6YYH2 397 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 A6NJ64 397 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 C16orf97H3BN30 126 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 M0R1B8 84 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 UBBP0CG47 229 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 RBMXP38159 391 aaKnown RBP7.03□□□□□ -1.28
BRCA1-208ENST00000468300 GDNFP39905 211 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 TFF3Q07654 80 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 FBXL19-AS1Q494R0 122 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 SLC22A6Q4U2R8 563 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 TMEM211Q6ICI0 200 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 PXT1Q8NFP0 134 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 OR5A2Q8NGI9 324 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 OR10R2Q8NGX6 335 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 KCNG3Q8TAE7 436 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 Q96M66 194 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 WFIKKN1Q96NZ8 548 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 OR51I2Q9H344 312 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 COA4Q9NYJ1 87 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 MTCH1Q9NZJ7 389 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 FZR1Q9UM11 496 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 MGAT4AQ9UM21 535 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 ING4Q9UNL4 249 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 DCHS2Q6V1P9 2916 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 POLEQ07864 2286 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 A0A0B4J293 547 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 ANKRD20A5PA0PJZ0 165 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 DPRXA6NFQ7 191 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 CCL21O00585 134 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 MGMTP16455 207 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 VEGFCP49767 419 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 SLC9A3R2Q15599 337 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 C11orf53Q8IXP5 236 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 ZNF561Q8N587 486 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 BORCS8Q96FH0 119 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 GPER1Q99527 375 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 MIOXQ9UGB7 285 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 STRAPQ9Y3F4 350 aaKnown RBP7.03□□□□□ -1.28
BRCA1-208ENST00000468300 MPC1Q9Y5U8 109 aa7.03□□□□□ -1.28
BRCA1-208ENST00000468300 TMEM235A6NFC5 223 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF729A6NN14 1252 aaPredicted RBP7.02□□□□□ -1.29
BRCA1-208ENST00000468300 H7C417 338 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 MFNGO00587 321 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 LYRM1O43325 122 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 RHBDL1O75783 438 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 MPIG6BO95866 241 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 ZNF250P15622 560 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 GNB3P16520 340 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 SERPINA2P20848 420 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 MPZP25189 248 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 CD40P25942 277 aa7.02□□□□□ -1.29
BRCA1-208ENST00000468300 SLC6A1P30531 599 aa7.02□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms