RNA–Protein interactions for RNA: ENST00000468040.2

SNIP1-202, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 5

Gene SNIP1, Length 931 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-202ENST00000468040 DYNC1I2Q13409 638 aaKnown RBP12.67□□□□□ -0.38
SNIP1-202ENST00000468040 ESCO2Q56NI9 601 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 LRRC10Q5BKY1 277 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 FAM216BQ8N7L0 139 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 PPP1R35Q8TAP8 253 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 LGALS14Q8TCE9 139 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 ACOT12Q8WYK0 555 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 Q96M66 194 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 TM2D1Q9BX74 207 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 BARHL1Q9BZE3 327 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 FAM234AQ9H0X4 552 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 KCNK15Q9H427 330 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 IFT22Q9H7X7 185 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 SPACA1Q9HBV2 294 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 CTSZQ9UBR2 303 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 OR5V1Q9UGF6 321 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 MAB21L2Q9Y586 359 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 CCDC168Q8NDH2 2452 aa12.67□□□□□ -0.38
SNIP1-202ENST00000468040 H7C1Q1 480 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 GPR37O15354 613 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 TFF1P04155 84 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 SNRPBP14678 240 aaKnown RBP12.66□□□□□ -0.38
SNIP1-202ENST00000468040 ZNF182P17025 639 aaPredicted RBP12.66□□□□□ -0.38
SNIP1-202ENST00000468040 GNB2P62879 340 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 COL10A1Q03692 680 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 SCN1BQ07699 218 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 TAF9Q16594 264 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 Q6P435 159 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 ASCC1Q8N9N2 400 aaKnown RBP12.66□□□□□ -0.38
SNIP1-202ENST00000468040 ZNRF1Q8ND25 227 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 DYNC2LI1Q8TCX1 351 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 SSBP3Q9BWW4 388 aaPredicted RBP12.66□□□□□ -0.38
SNIP1-202ENST00000468040 BATF3Q9NR55 127 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 CCDC59Q9P031 241 aaKnown RBP12.66□□□□□ -0.38
SNIP1-202ENST00000468040 SLC25A10Q9UBX3 287 aaPredicted RBP12.66□□□□□ -0.38
SNIP1-202ENST00000468040 CLN8Q9UBY8 286 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 SPATA2Q9UM82 520 aa12.66□□□□□ -0.38
SNIP1-202ENST00000468040 A0A1B0GW55 424 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 METTL21EPA6NDL7 271 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 SIRPB1O00241 398 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DVL1O14640 695 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 ZNF737O75373 536 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 PAHP00439 452 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DUX4L2P0CJ85 424 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DUX4L3P0CJ86 424 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DUX4L4P0CJ87 422 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DUX4L5P0CJ88 424 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DUX4L6P0CJ89 424 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DUX4L7P0CJ90 424 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 GABRR1P24046 479 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 IL2RGP31785 369 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 C11orf91Q3C1V1 193 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DUX4L9Q6RFH8 374 aaPredicted RBP12.65□□□□□ -0.38
SNIP1-202ENST00000468040 TMEM185AQ8NFB2 350 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 SNX22Q96L94 193 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 LPAR5Q9H1C0 372 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 DUX4Q9UBX2 424 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 METRNQ9UJH8 293 aa12.65□□□□□ -0.38
SNIP1-202ENST00000468040 A8MXK9 166 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 K7N7A8 449 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 SLC33A1O00400 549 aaPredicted RBP12.64□□□□□ -0.39
SNIP1-202ENST00000468040 PSPNO60542 156 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 FOXH1O75593 365 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 SCGNO76038 276 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 TK1P04183 234 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 SELLP14151 372 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 SEC61A1P61619 476 aaKnown RBP12.64□□□□□ -0.39
SNIP1-202ENST00000468040 PDCD1Q15116 288 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 PAN3Q58A45 887 aaKnown RBP12.64□□□□□ -0.39
SNIP1-202ENST00000468040 ATAD3CQ5T2N8 411 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 WDR25Q64LD2 544 aaPredicted RBP12.64□□□□□ -0.39
SNIP1-202ENST00000468040 MZT2AQ6P582 158 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 ZNF841Q6ZN19 808 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 C17orf107Q6ZR85 190 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 OR8H2Q8N162 312 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 FAM89BQ8N5H3 189 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 OR56B1Q8NGI3 324 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 OR5D13Q8NGL4 314 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 ST8SIA4Q92187 359 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 C1orf159Q96HA4 380 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 COX4I2Q96KJ9 171 aa12.64□□□□□ -0.39
SNIP1-202ENST00000468040 RCC2Q9P258 522 aaKnown RBP12.64□□□□□ -0.39
SNIP1-202ENST00000468040 SETXQ7Z333 2677 aaKnown RBP12.64□□□□□ -0.39
SNIP1-202ENST00000468040 TRAV24A0A0B4J272 114 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 TMEM82A0PJX8 343 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 A6NHS1 94 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 B4DSR2 109 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 PDCD6O75340 191 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 ECDO95905 644 aaPredicted RBP12.63□□□□□ -0.39
SNIP1-202ENST00000468040 CSN2P05814 226 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 GLAP06280 429 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 NDUFB7P17568 137 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 FUT3P21217 361 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 KCNJ3P48549 501 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 GZMKP49863 264 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 EFNB2P52799 333 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 RBM39Q14498 530 aaKnown RBP12.63□□□□□ -0.39
SNIP1-202ENST00000468040 GRK1Q15835 563 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 TMEM249Q2WGJ8 235 aa12.63□□□□□ -0.39
SNIP1-202ENST00000468040 CD276Q5ZPR3 534 aa12.63□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55 ms