RNA–Protein interactions for RNA: ENST00000467847.1

TRIM56-203, Transcript of tripartite motif containing 56, humanhuman

TSL 2

Gene TRIM56, Length 581 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-203ENST00000467847 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.81□□□□□ -0.2
TRIM56-203ENST00000467847 DPM3Q9P2X0 92 aa13.81□□□□□ -0.2
TRIM56-203ENST00000467847 GNG8Q9UK08 70 aa13.81□□□□□ -0.2
TRIM56-203ENST00000467847 TRGV10A0A0A0MS01 117 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 TCRBV4S1A1TA0A5B7 111 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 SIRPB1O00241 398 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 MPIG6BO95866 241 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 VSIG8P0DPA2 414 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 PRKACBP22694 351 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 KIR3DL2P43630 455 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 ARHGDIBP52566 201 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 BDH1Q02338 343 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 TP53I3Q53FA7 332 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 TCTEX1D4Q5JR98 221 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 OR52W1Q6IF63 320 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 BAIAP2L2Q6UXY1 529 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 RTN4RL2Q86UN3 420 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 ZNF596Q8TC21 504 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 ADAT3Q96EY9 351 aaPredicted RBP13.8□□□□□ -0.2
TRIM56-203ENST00000467847 CIB1Q99828 191 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 GABARAPL1Q9H0R8 117 aa13.8□□□□□ -0.2
TRIM56-203ENST00000467847 TSSC4Q9Y5U2 329 aaPredicted RBP13.8□□□□□ -0.2
TRIM56-203ENST00000467847 IGKV1-9A0A0C4DH69 117 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 FAM172BPA6NC97 362 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 SH2D1BO14796 132 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 LPLP06858 475 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 ZNF20P17024 532 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 CDK2P24941 298 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 CDC42P60953 191 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 SLC35A2P78381 396 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 PDZK1IP1Q13113 114 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 ABCA11PQ4W5N1 156 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 HEPN1Q6WQI6 88 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 LHFPL2Q6ZUX7 228 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 MYDGFQ969H8 173 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 SLC25A33Q9BSK2 321 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 HMG20AQ9NP66 347 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 EXOSC4Q9NPD3 245 aaKnown RBP13.79□□□□□ -0.2
TRIM56-203ENST00000467847 GSTK1Q9Y2Q3 226 aa13.79□□□□□ -0.2
TRIM56-203ENST00000467847 FUOMA2VDF0 154 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 LEUTXA8MZ59 168 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 OR2H2O95918 312 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 OCM2P0CE71 109 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 OCMP0CE72 109 aaPredicted RBP13.78□□□□□ -0.2
TRIM56-203ENST00000467847 ATF1P18846 271 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 FASP25445 335 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 ISL1P61371 349 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 ZNF85Q03923 595 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 AESQ08117 197 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 KHDC1LQ5JSQ8 128 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 TMEM244Q5VVB8 128 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 UTS2BQ765I0 119 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 OR4X2Q8NGF9 303 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 OR2G2Q8NGZ5 317 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 BCAS4Q8TDM0 211 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 RFKQ969G6 155 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 RFT1Q96AA3 541 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 FGGYQ96C11 551 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 PCDHGB5Q9Y5G0 923 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 COL7A1Q02388 2944 aa13.78□□□□□ -0.2
TRIM56-203ENST00000467847 OR2F2O95006 317 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 IGLV1-47P01700 117 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 POLR2IP36954 125 aaKnown RBP13.77□□□□□ -0.21
TRIM56-203ENST00000467847 CEACAM3P40198 252 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 GLIPR1P48060 266 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 TMED1Q13445 227 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 KPNB1Q14974 876 aaKnown RBP13.77□□□□□ -0.21
TRIM56-203ENST00000467847 AMIGO2Q86SJ2 522 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 OR8J1Q8NGP2 316 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 CORO2AQ92828 525 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 RNF166Q96A37 237 aaPredicted RBP13.77□□□□□ -0.21
TRIM56-203ENST00000467847 EME1Q96AY2 570 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 CREB3L1Q96BA8 519 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 SPSB1Q96BD6 273 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 RCC1LQ96I51 464 aaKnown RBP13.77□□□□□ -0.21
TRIM56-203ENST00000467847 OPALINQ96PE5 141 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 RBM14Q96PK6 669 aaKnown RBP13.77□□□□□ -0.21
TRIM56-203ENST00000467847 RIBC2Q9H4K1 309 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 ZNF286AQ9HBT8 521 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 TAS2R3Q9NYW6 316 aa13.77□□□□□ -0.21
TRIM56-203ENST00000467847 IGKV1-12A0A0C4DH73 117 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 SH2D7A6NKC9 451 aaPredicted RBP13.76□□□□□ -0.21
TRIM56-203ENST00000467847 K7EIL1 84 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 TOR1AO14656 332 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 CLIC3O95833 236 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 IGKV1D-12P01611 117 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 ZNF44P15621 663 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 GDNFP39905 211 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 PTGFRP43088 359 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 SCN1BQ07699 218 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 C10orf99Q6UWK7 81 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 OR4D6Q8NGJ1 314 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 GABARAPL3Q9BY60 117 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 NEK6Q9HC98 313 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 FRRS1LQ9P0K9 344 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 AP4S1Q9Y587 144 aa13.76□□□□□ -0.21
TRIM56-203ENST00000467847 ODAMA1E959 279 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 BUB1B-PAK6H3BSN5 160 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 KDM4BO94953 1096 aa13.75□□□□□ -0.21
TRIM56-203ENST00000467847 AMY1AP04745 511 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms