RNA–Protein interactions for RNA: ENST00000467681.5

SSBP1-206, Transcript of single stranded DNA binding protein 1, humanhuman

TSL 2

Gene SSBP1, Length 630 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP1-206ENST00000467681 S100A13Q99584 98 aa11.22□□□□□ -0.61
SSBP1-206ENST00000467681 UQCC2Q9BRT2 126 aa11.22□□□□□ -0.61
SSBP1-206ENST00000467681 FAM192AQ9GZU8 254 aa11.22□□□□□ -0.61
SSBP1-206ENST00000467681 SIRPDQ9H106 197 aa11.22□□□□□ -0.61
SSBP1-206ENST00000467681 PCDHB16Q9NRJ7 776 aa11.22□□□□□ -0.61
SSBP1-206ENST00000467681 NUP50Q9UKX7 468 aa11.22□□□□□ -0.61
SSBP1-206ENST00000467681 A0A0G2JK05 382 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 TRDV1A0A1B0GX56 115 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 PSPNO60542 156 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 ZNF780AO75290 641 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-206ENST00000467681 TOX4O94842 621 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 OR2H2O95918 312 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 RPL31P62899 125 aaKnown RBP11.21□□□□□ -0.61
SSBP1-206ENST00000467681 SCN1BQ07699 218 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 SCGB2A2Q13296 93 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 GPR176Q14439 515 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 C1orf100Q5SVJ3 147 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 METTL11BQ5VVY1 283 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 CD200R1LQ6Q8B3 271 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 CMTM4Q8IZR5 234 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 OR8H2Q8N162 312 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 CHST4Q8NCG5 386 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 OR4S1Q8NGB4 309 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 OR4M1Q8NGD0 313 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 OR10K1Q8NGX5 313 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 PPP1R35Q8TAP8 253 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 MUL1Q969V5 352 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 FOXRED1Q96CU9 486 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-206ENST00000467681 NR1H4Q96RI1 486 aaPredicted RBP11.21□□□□□ -0.61
SSBP1-206ENST00000467681 SLITRK2Q9H156 845 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 EXOSC4Q9NPD3 245 aaKnown RBP11.21□□□□□ -0.61
SSBP1-206ENST00000467681 C19orf12Q9NSK7 152 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 NDUFB11Q9NX14 153 aa11.21□□□□□ -0.61
SSBP1-206ENST00000467681 MRPS28Q9Y2Q9 187 aaKnown RBP11.21□□□□□ -0.61
SSBP1-206ENST00000467681 A0A1W2PQ09 198 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 M0R1W7 72 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 CCRL2O00421 344 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 MGST3O14880 152 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 ARL6IP5O75915 188 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 CSTBP04080 98 aaKnown RBP11.2□□□□□ -0.62
SSBP1-206ENST00000467681 EPHA1P21709 976 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 GALP22466 123 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 GABRR1P24046 479 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 FPR2P25090 351 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 PSMB9P28065 219 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 IL13RA2Q14627 380 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 SLC22A6Q4U2R8 563 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 NHLRC3Q5JS37 347 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 SYT6Q5T7P8 510 aaPredicted RBP11.2□□□□□ -0.62
SSBP1-206ENST00000467681 GLT8D1Q68CQ7 371 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 GLIPR1L1Q6UWM5 242 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 GDPD3Q7L5L3 318 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 FAM185AQ8N0U4 392 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 KIR3DL3Q8N743 410 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 Q8N7P7 452 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 OR4D6Q8NGJ1 314 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 PCGF1Q9BSM1 259 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 ONECUT1Q9UBC0 465 aa11.2□□□□□ -0.62
SSBP1-206ENST00000467681 ATRQ13535 2644 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 SIRPB1O00241 398 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 SLC33A1O00400 549 aaPredicted RBP11.19□□□□□ -0.62
SSBP1-206ENST00000467681 IGHV4-38-2P0DP08 117 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 GTF2F2P13984 249 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 ZNF44P15621 663 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 PRTN3P24158 256 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 ERP29P30040 261 aaKnown RBP11.19□□□□□ -0.62
SSBP1-206ENST00000467681 OR3A1P47881 315 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 BPIFB3P59826 476 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 MEF2CQ06413 473 aaPredicted RBP11.19□□□□□ -0.62
SSBP1-206ENST00000467681 PDCD1Q15116 288 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 GRK1Q15835 563 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 TUSC1Q2TAM9 212 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 KRTAP21-3Q3LHN1 58 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 OSR2Q8N2R0 312 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 C11orf42Q8N5U0 333 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 TSPAN14Q8NG11 270 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 MRPS24Q96EL2 167 aaKnown RBP11.19□□□□□ -0.62
SSBP1-206ENST00000467681 C1orf147Q96MC9 270 aaPredicted RBP11.19□□□□□ -0.62
SSBP1-206ENST00000467681 UNKLQ9H9P5 680 aaKnown RBP11.19□□□□□ -0.62
SSBP1-206ENST00000467681 GHRLQ9UBU3 117 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 ZNF69Q9UC07 566 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 ST3GAL6Q9Y274 331 aa11.19□□□□□ -0.62
SSBP1-206ENST00000467681 IGHV3OR16-10A0A075B7F0 116 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 A0A087WXM4 84 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 TRAV1-2A0A0B4J238 106 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 TRAV24A0A0B4J272 114 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 CENPVL3A0A0U1RRI6 287 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 A0A1W2PPH5 198 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 TNFAIP8O95379 198 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 SERPINA2P20848 420 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 CALRP27797 417 aaKnown RBP11.18□□□□□ -0.62
SSBP1-206ENST00000467681 PSMD7P51665 324 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 BLMHQ13867 455 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 PIGYQ3MUY2 71 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 GPR157Q5UAW9 335 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 AWAT2Q6E213 333 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 BCL6BQ8N143 479 aaPredicted RBP11.18□□□□□ -0.62
SSBP1-206ENST00000467681 TNFRSF14Q92956 283 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 GFI1Q99684 422 aa11.18□□□□□ -0.62
SSBP1-206ENST00000467681 CHST6Q9GZX3 395 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms