RNA–Protein interactions for RNA: ENST00000467319.1

MSH5-212, Transcript of mutS homolog 5, humanhuman

TSL 2

Gene MSH5, Length 688 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-212ENST00000467319 OR2H2O95918 312 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 MAS1P04201 325 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 CSN2P05814 226 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 CALCBP10092 127 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 NDUFB7P17568 137 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 LMO1P25800 156 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 DUSP1P28562 367 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 SNU13P55769 128 aaKnown RBP9.1□□□□□ -0.95
MSH5-212ENST00000467319 RBM11P57052 281 aaKnown RBP9.1□□□□□ -0.95
MSH5-212ENST00000467319 RSU1Q15404 277 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 C1orf100Q5SVJ3 147 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 TCF23Q7RTU1 214 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 PRIMA1Q86XR5 153 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 ASCC1Q8N9N2 400 aaKnown RBP9.1□□□□□ -0.95
MSH5-212ENST00000467319 CHST4Q8NCG5 386 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 OR10K1Q8NGX5 313 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 H1FXQ92522 213 aaKnown RBP9.1□□□□□ -0.95
MSH5-212ENST00000467319 WDFY2Q96P53 400 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 IFT22Q9H7X7 185 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 TCF7L1Q9HCS4 588 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 EXOSC4Q9NPD3 245 aaKnown RBP9.1□□□□□ -0.95
MSH5-212ENST00000467319 GSTK1Q9Y2Q3 226 aa9.1□□□□□ -0.95
MSH5-212ENST00000467319 MRPS28Q9Y2Q9 187 aaKnown RBP9.1□□□□□ -0.95
MSH5-212ENST00000467319 TRAV40A0A0B4J280 105 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 TRDV1A0A1B0GX56 115 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 M0R1W7 72 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 SLC33A1O00400 549 aaPredicted RBP9.09□□□□□ -0.95
MSH5-212ENST00000467319 SLC22A1O15245 554 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 ZNF780AO75290 641 aaPredicted RBP9.09□□□□□ -0.95
MSH5-212ENST00000467319 SRMP19623 302 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 EPHA1P21709 976 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 CFPP27918 469 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 SRP14P37108 136 aaKnown RBP9.09□□□□□ -0.95
MSH5-212ENST00000467319 CAPZA1P52907 286 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 DLX6P56179 175 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 PAX5Q02548 391 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 NEDD8Q15843 81 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 PIGYQ3MUY2 71 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 C9orf139Q6ZV77 190 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 Q8N7P7 452 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 TSPAN14Q8NG11 270 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 OR4S1Q8NGB4 309 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 NANPQ8TBE9 248 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 SNX22Q96L94 193 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 METTL9Q9H1A3 318 aa9.09□□□□□ -0.95
MSH5-212ENST00000467319 UNKLQ9H9P5 680 aaKnown RBP9.09□□□□□ -0.95
MSH5-212ENST00000467319 A0A087WXM4 84 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 TRAV1-2A0A0B4J238 106 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 TRAV24A0A0B4J272 114 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 A0A1W2PP11 408 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 SHISA3A0PJX4 238 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 SIRPB1O00241 398 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 SH2D1BO14796 132 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 SMIM18P0DKX4 95 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 IGHV4-38-2P0DP08 117 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 GABRR1P24046 479 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 CALRP27797 417 aaKnown RBP9.08□□□□□ -0.96
MSH5-212ENST00000467319 FGF9P31371 208 aaPredicted RBP9.08□□□□□ -0.96
MSH5-212ENST00000467319 P2RX3P56373 397 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 RPL31P62899 125 aaKnown RBP9.08□□□□□ -0.96
MSH5-212ENST00000467319 ZNF273Q14593 569 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 KRTAP21-3Q3LHN1 58 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 SLC22A6Q4U2R8 563 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 METTL11BQ5VVY1 283 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 TMEM200BQ69YZ2 307 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 AWAT2Q6E213 333 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 METAP1DQ6UB28 335 aaPredicted RBP9.08□□□□□ -0.96
MSH5-212ENST00000467319 GLIPR1L1Q6UWM5 242 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 C1orf122Q6ZSJ8 110 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 LINC00596Q86U02 117 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 OSR2Q8N2R0 312 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 TMEM104Q8NE00 496 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 OR6M1Q8NGM8 313 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 SLC25A28Q96A46 364 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 FOXRED1Q96CU9 486 aaPredicted RBP9.08□□□□□ -0.96
MSH5-212ENST00000467319 MRPS24Q96EL2 167 aaKnown RBP9.08□□□□□ -0.96
MSH5-212ENST00000467319 COQ2Q96H96 371 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 CHST6Q9GZX3 395 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 SLITRK2Q9H156 845 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 ZNF581Q9P0T4 197 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 RCC2Q9P258 522 aaKnown RBP9.08□□□□□ -0.96
MSH5-212ENST00000467319 ONECUT1Q9UBC0 465 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 GHRLQ9UBU3 117 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 GLS2Q9UI32 602 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 STUB1Q9UNE7 303 aa9.08□□□□□ -0.96
MSH5-212ENST00000467319 FBN1P35555 2871 aaKnown RBP9.07□□□□□ -0.96
MSH5-212ENST00000467319 ANK2Q01484 3957 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 A0A0G2JK05 382 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 A0A1W2PQ09 198 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 SLC17A2O00624 439 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 MGST3O14880 152 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 TOX4O94842 621 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 HTR3BO95264 441 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 RBP4P02753 201 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 UBBP0CG47 229 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 GTF2F2P13984 249 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 JUNBP17275 347 aaPredicted RBP9.07□□□□□ -0.96
MSH5-212ENST00000467319 SERPINA2P20848 420 aa9.07□□□□□ -0.96
MSH5-212ENST00000467319 ERP29P30040 261 aaKnown RBP9.07□□□□□ -0.96
MSH5-212ENST00000467319 ARF6P62330 175 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms