RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 CLEC2AQ6UVW9 174 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 Q8WTZ3 238 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 TSPAN32Q96QS1 320 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 LPAR2Q9HBW0 351 aa7.72□□□□□ -1.17
HPS4-209ENST00000466781 FAM24AA6NFZ4 105 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 ATXN7O15265 892 aaPredicted RBP7.71□□□□□ -1.17
HPS4-209ENST00000466781 SPINK4O60575 86 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 RELL2Q8NC24 303 aaPredicted RBP7.71□□□□□ -1.17
HPS4-209ENST00000466781 PTP4A1Q93096 173 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 ALG14Q96F25 216 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 TMUB1Q9BVT8 246 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 SLC17A5Q9NRA2 495 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 ZNFX1Q9P2E3 1918 aaKnown RBP7.71□□□□□ -1.17
HPS4-209ENST00000466781 NKX2-2O95096 273 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 PTBP3O95758 552 aaKnown RBP7.71□□□□□ -1.17
HPS4-209ENST00000466781 EML2O95834 649 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 HAND1O96004 215 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 TFAP2AP05549 437 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 SBK3P0C264 359 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 HIST1H1EP10412 219 aaKnown RBP7.71□□□□□ -1.17
HPS4-209ENST00000466781 CD1BP29016 333 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 WDR38Q5JTN6 314 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 BHLHA9Q7RTU4 235 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 CACNG5Q9UF02 275 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 SHROOM3Q8TF72 1996 aa7.71□□□□□ -1.17
HPS4-209ENST00000466781 C5orf52A6NGY3 159 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 CIDEAO60543 219 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 ZNF737O75373 536 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 MOSPD3O75425 235 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 FAM87AP0C7U9 286 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 CD40P25942 277 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 EVX1P49640 407 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 MMP15P51511 669 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 ZNF154Q13106 437 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 ETFDHQ16134 617 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 ATP6V1FQ16864 119 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 SPICQ8N5J4 248 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 SLC26A10Q8NG04 563 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 NUDT16L1Q9BRJ7 211 aaKnown RBP7.71□□□□□ -1.18
HPS4-209ENST00000466781 DNAJB12Q9NXW2 375 aaKnown RBP7.71□□□□□ -1.18
HPS4-209ENST00000466781 LPAR3Q9UBY5 353 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 ZMAT5Q9UDW3 170 aaKnown RBP7.71□□□□□ -1.18
HPS4-209ENST00000466781 DICER1Q9UPY3 1922 aaKnown RBP7.71□□□□□ -1.18
HPS4-209ENST00000466781 LTBP1Q14766 1721 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 FABP4P15090 132 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 UBE2L3P68036 154 aaKnown RBP7.71□□□□□ -1.18
HPS4-209ENST00000466781 RRN3P1Q2M238 152 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 C11orf87Q6NUJ2 197 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 SMIM12Q96EX1 92 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 RASL12Q9NYN1 266 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 TCRBV5S2A0A599 114 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 KIAA1324LA8MWY0 1029 aaPredicted RBP7.71□□□□□ -1.18
HPS4-209ENST00000466781 PLPP3O14495 311 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 PNPP00491 289 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 SFTA3P0C7M3 94 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 CCKARP32238 428 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 TMPRSS3P57727 454 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 SLC16A12Q6ZSM3 486 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 ZNF683Q8IZ20 524 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 R3HDM4Q96D70 268 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 PERPQ96FX8 193 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 GSX2Q9BZM3 304 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 PRDM7Q9NQW5 492 aa7.71□□□□□ -1.18
HPS4-209ENST00000466781 VDAC1P21796 283 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 HLXQ14774 488 aaPredicted RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 ZBTB37Q5TC79 503 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 ZNF426Q9BUY5 554 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 NAA60Q9H7X0 242 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 ZMIZ1Q9ULJ6 1067 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 INSIG2Q9Y5U4 225 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 PDCD6O75340 191 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 SFT2D2O95562 160 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 KIR3DL2P43630 455 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 HIST1H3AP68431 136 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 TAGLNQ01995 201 aaKnown RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 MIDNQ504T8 468 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 C1orf185Q5T7R7 199 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 C6orf201Q7Z4U5 140 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 OR4C5Q8NGB2 326 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 OR10A7Q8NGE5 316 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 ASB10Q8WXI3 467 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 MRPL37Q9BZE1 423 aaKnown RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 TMEM167BQ9NRX6 74 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 NTMQ9P121 344 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 VSIG4Q9Y279 399 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 SLC35B1P78383 322 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 CEBPEQ15744 281 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 LINC00303Q3SY05 128 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 PRSS42Q7Z5A4 293 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 GSX1Q9H4S2 264 aaPredicted RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 ZNF552Q9H707 407 aaPredicted RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 WASHC3Q9Y3C0 194 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 A0A1B0GTL3 188 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 MAP1LC3B2A6NCE7 125 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 AKR7A2O43488 359 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 WNT1P04628 370 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 FTH1P19P0C7X4 201 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 PPP1CCP36873 323 aaKnown RBP7.7□□□□□ -1.18
HPS4-209ENST00000466781 NKG7Q16617 165 aa7.7□□□□□ -1.18
HPS4-209ENST00000466781 OR10G4Q8NGN3 311 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms