RNA–Protein interactions for RNA: ENST00000466538.1

CDC42BPA-211, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 3

Gene CDC42BPA, Length 568 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-211ENST00000466538 HBMQ6B0K9 141 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 FA2HQ7L5A8 372 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 PRNTQ86SH4 94 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 C1orf64Q8NEQ6 169 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 OR8G5Q8NG78 346 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 OR4K17Q8NGC6 315 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 OR4D6Q8NGJ1 314 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 OR1P1Q8NH06 330 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 ITLN2Q8WWU7 325 aaPredicted RBP2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 PPP1R36Q96LQ0 422 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 PITX2Q99697 317 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 PLEKHA1Q9HB21 404 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 OR2S2Q9NQN1 319 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 UBAP1Q9NZ09 502 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 MAT2BQ9NZL9 334 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 USP42Q9H9J4 1324 aaKnown RBP2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 GPR179Q6PRD1 2367 aa2.31□□□□□ -2.04
CDC42BPA-211ENST00000466538 PGPA6NDG6 321 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 K7EPK0 472 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 UBDO15205 165 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 GYG2O15488 501 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 SCN2BO60939 215 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 NIPSNAP2O75323 286 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 CDK14O94921 469 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 FADS2O95864 444 aaKnown RBP2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 PTHLHP12272 177 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 ELK4P28324 431 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 IL12BP29460 328 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 SLAMF1Q13291 335 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 TTMPQ5BVD1 217 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 GLYATQ6IB77 296 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 ERICH5Q6P6B1 374 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 TMEM136Q6ZRR5 245 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 LINC00596Q86U02 117 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 CDRT4Q8N9R6 151 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 ZNF721Q8TF20 911 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 PDCD6IPQ8WUM4 868 aaKnown RBP2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 LHX5Q9H2C1 402 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 TMEM38BQ9NVV0 291 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 TAS2R1Q9NYW7 299 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 CHMP5Q9NZZ3 219 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 CD300AQ9UGN4 299 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 CYB5R1Q9UHQ9 305 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 ENPP5Q9UJA9 477 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 SLC22A14Q9Y267 594 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 SETD1AO15047 1707 aaKnown RBP2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 TMEM131Q92545 1883 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 SVILO95425 2214 aa2.3□□□□□ -2.04
CDC42BPA-211ENST00000466538 ERICH2A1L162 156 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 GOLGA8IPA6NC78 632 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 IGLL5B9A064 214 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 LDOC1O95751 146 aaPredicted RBP2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 S100A6P06703 90 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 CECR9P0C854 216 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 PRTN3P24158 256 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 TGFBR1P36897 503 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 GCLMP48507 274 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 UBE2IP63279 158 aaKnown RBP2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 BAXQ07812 192 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 IL15RAQ13261 267 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 COTL1Q14019 142 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 KRTAP5-1Q6L8H4 278 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 Q6ZT83 130 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 MRPL52Q86TS9 123 aaKnown RBP2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 LRRC6Q86X45 466 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 SELENOHQ8IZQ5 122 aaKnown RBP2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 IFT81Q8WYA0 676 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 TNFRSF14Q92956 283 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 ZNF75AQ96N20 296 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 BIRC8Q96P09 236 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 TRNT1Q96Q11 434 aaKnown RBP2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 CYTH2Q99418 400 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 RTBDNQ9BSG5 229 aaPredicted RBP2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 MS4A12Q9NXJ0 267 aa2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 C14orf166Q9Y224 244 aaKnown RBP2.29□□□□□ -2.04
CDC42BPA-211ENST00000466538 A0A1B0GXF2 115 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 MYBPHLA2RUH7 354 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 RBFOX3A6NFN3 312 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 RNASEK-C17orf49H0YIS7 233 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 FFAR1O14842 300 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 MYO1DO94832 1006 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 IGHG2P01859 326 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 SCGB1C2P0DMR2 95 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 SLC2A1P11166 492 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 MLNP12872 115 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 NQO2P16083 231 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 PSMB9P28065 219 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 MAGEA3P43357 314 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 MYL6P60660 151 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 CD164Q04900 197 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 ENDOGQ14249 297 aaKnown RBP2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 TRAM1Q15629 374 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 TRIP13Q15645 432 aaPredicted RBP2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 BSXQ3C1V8 233 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 TMEM215Q68D42 235 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 ZNF470Q6ECI4 717 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 FAM131AQ6UXB0 335 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 TPGS1Q6ZTW0 290 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 CALHM3Q86XJ0 350 aa2.28□□□□□ -2.04
CDC42BPA-211ENST00000466538 RPRMLQ8N4K4 120 aa2.28□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms