RNA–Protein interactions for RNA: ENST00000464764.5

CLCNKA-204, Transcript of chloride voltage-gated channel Ka, humanhuman

TSL 2

Gene CLCNKA, Length 3,060 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-204ENST00000464764 PATE4P0C8F1 98 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 TRGC1P0CF51 173 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 SELLP14151 372 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 PTGDSP41222 190 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 ENDOGQ14249 297 aaKnown RBP10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 TMEM123Q8N131 208 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 LGI3Q8N145 548 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 HIST3H2BBQ8N257 126 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 PLEK2Q9NYT0 353 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 WSB1Q9Y6I7 421 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 ATG2AQ2TAZ0 1938 aa10.92□□□□□ -0.66
CLCNKA-204ENST00000464764 A0A1B0GX78 115 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 C10orf142B7Z368 130 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 HIST1H1BP16401 226 aaKnown RBP10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 NDUFB7P17568 137 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 ECI1P42126 302 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 CCR5P51681 352 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 LSM6P62312 80 aaKnown RBP10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 SSX9Q7RTT3 188 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 ODF3L1Q8IXM7 274 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 MVB12AQ96EY5 273 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 OXGR1Q96P68 337 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 FGF21Q9NSA1 209 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 CLEC1BQ9P126 229 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 M0R135 149 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 PPP1R2P9O14990 202 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 SCAF4O95104 1147 aaKnown RBP10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 CD63P08962 238 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 DYNLT3P51808 116 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 HIST3H3Q16695 136 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 LFNGQ8NES3 379 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 OR14L1PQ8NHC6 308 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 NAT6Q93015 286 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 ZNF799Q96GE5 643 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 UCN2Q96RP3 112 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 METTL9Q9H1A3 318 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 GFOD1Q9NXC2 390 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 P4HTMQ9NXG6 502 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 ZNF407Q9C0G0 2248 aa10.91□□□□□ -0.66
CLCNKA-204ENST00000464764 SEC14L6B5MCN3 397 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 TMEM252Q8N6L7 170 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 NFAM1Q8NET5 270 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 CA5BP1Q8WTZ4 195 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 PP6455Q8WZ26 134 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 MRGPRX4Q96LA9 322 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 SSX3Q99909 188 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 CALHM2Q9HA72 323 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 PISDQ9UG56 409 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 FOXD3Q9UJU5 478 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 MSR1P21757 451 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 GUCA1AP43080 201 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 NKX2-1P43699 371 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 NKX6-1P78426 367 aaPredicted RBP10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 ZNF154Q13106 437 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 ANKRD37Q7Z713 158 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 GJC3Q8NFK1 279 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 NKX2-4Q9H2Z4 354 aa10.9□□□□□ -0.66
CLCNKA-204ENST00000464764 IGHV1OR21-1A0A087WYE8 117 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF587BE7ETH6 402 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 H3BP45 60 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 TIAF1O95411 115 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 PGA5P0DJD9 388 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF133P52736 654 aaPredicted RBP10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 RPL23AP62750 156 aaKnown RBP10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 SPIN3Q5JUX0 258 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 CYB5R2Q6BCY4 276 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 LRTM2Q8N967 370 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 GTF3AQ92664 365 aaKnown RBP10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 TVP23CQ96ET8 276 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 NIPSNAP3BQ9BS92 247 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 OPA3Q9H6K4 179 aa10.9□□□□□ -0.67
CLCNKA-204ENST00000464764 A0A1B0GW64 132 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 ADAM20O43506 726 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 USF2Q15853 346 aaPredicted RBP10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 KCNMB1Q16558 191 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 ZNF880Q6PDB4 577 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 PLPP5Q8NEB5 264 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 SNX22Q96L94 193 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 C11orf1Q9H5F2 150 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 UFSP2Q9NUQ7 469 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 DIDO1Q9BTC0 2240 aaKnown RBP10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 A0A0U1RQV5 110 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 C3orf85A0A1B0GTC6 90 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 G3V3Y1 287 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 MPPED1O15442 326 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 CA11O75493 328 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 GLIPR1P48060 266 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 HNF4GQ14541 408 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 NABP1Q96AH0 204 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 GNG13Q9P2W3 67 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 ST3GAL6Q9Y274 331 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 ESPL1Q14674 2120 aa10.89□□□□□ -0.67
CLCNKA-204ENST00000464764 OR5H1A6NKK0 313 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 CTSSP25774 331 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 CD38P28907 300 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 GNRHRP30968 328 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 RBP2P50120 134 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 RAB11AP62491 216 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 ARL6IP1Q15041 203 aa10.88□□□□□ -0.67
CLCNKA-204ENST00000464764 IZUMO4Q1ZYL8 232 aa10.88□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms