RNA–Protein interactions for RNA: ENST00000464493.5

SQSTM1-205, Transcript of sequestosome 1, humanhuman

TSL 4

Gene SQSTM1, Length 532 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQSTM1-205ENST00000464493 KPTNQ9Y664 436 aa11.97□□□□□ -0.49
SQSTM1-205ENST00000464493 SIRPB1O00241 398 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 CCRL2O00421 344 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 DEGS1O15121 323 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 PSPNO60542 156 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 ZNF780AO75290 641 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 ARL6IP5O75915 188 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 OR2H2O95918 312 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 CSTBP04080 98 aaKnown RBP11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 MMP9P14780 707 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 GABRR1P24046 479 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 LMO1P25800 156 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 PSMB9P28065 219 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 RPL31P62899 125 aaKnown RBP11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 SCN1BQ07699 218 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 GPR176Q14439 515 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 KLF17Q5JT82 389 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 GLT8D1Q68CQ7 371 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 Q6P435 159 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 GDPD3Q7L5L3 318 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 LRRTM1Q86UE6 522 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 PRIMA1Q86XR5 153 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 LYPD6Q86Y78 171 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 CMTM4Q8IZR5 234 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 FAM185AQ8N0U4 392 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 OR8H2Q8N162 312 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 OR4M1Q8NGD0 313 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 OR51T1Q8NGJ9 327 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 PPP1R35Q8TAP8 253 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 TBC1D15Q8TC07 691 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 FOXRED1Q96CU9 486 aaPredicted RBP11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 UQCC2Q9BRT2 126 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 SIRPDQ9H106 197 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 C19orf12Q9NSK7 152 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 NDUFB11Q9NX14 153 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 NUP50Q9UKX7 468 aa11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 MRPS28Q9Y2Q9 187 aaKnown RBP11.96□□□□□ -0.49
SQSTM1-205ENST00000464493 A0A0G2JK05 382 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 TNFAIP8O95379 198 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 ZNF44P15621 663 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 SERPINA2P20848 420 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 EPHA1P21709 976 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 IL13RA2Q14627 380 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 PDCD1Q15116 288 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 GRK1Q15835 563 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 SLC22A6Q4U2R8 563 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 TMEM200BQ69YZ2 307 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 AWAT2Q6E213 333 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 GLIPR1L1Q6UWM5 242 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 OSR2Q8N2R0 312 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 KIR3DL3Q8N743 410 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 CHST4Q8NCG5 386 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 OR4D6Q8NGJ1 314 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 TBX15Q96SF7 602 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 CHST6Q9GZX3 395 aa11.95□□□□□ -0.5
SQSTM1-205ENST00000464493 A0A1W2PPH5 198 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 M0R1W7 72 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 IGHV4-38-2P0DP08 117 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 GTF2F2P13984 249 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 FPR2P25090 351 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 CALRP27797 417 aaKnown RBP11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 EDDM3BP56851 147 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 BLMHQ13867 455 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 PIGYQ3MUY2 71 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 SYT6Q5T7P8 510 aaPredicted RBP11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 CD200R1LQ6Q8B3 271 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 C1orf122Q6ZSJ8 110 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 VMO1Q7Z5L0 202 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 OR4S1Q8NGB4 309 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 OCEL1Q9H607 264 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 ST3GAL6Q9Y274 331 aa11.94□□□□□ -0.5
SQSTM1-205ENST00000464493 IGHV3OR16-10A0A075B7F0 116 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 A0A087WXM4 84 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 TRAV40A0A0B4J280 105 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 TRDV1A0A1B0GX56 115 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 A0A1W2PP11 408 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 SLC33A1O00400 549 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 MGST3O14880 152 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 CD37P11049 281 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 GALP22466 123 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 OR3A1P47881 315 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 MEF2CQ06413 473 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 EDDM3AQ14507 147 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 NEDD8Q15843 81 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 NHLRC3Q5JS37 347 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 GPR157Q5UAW9 335 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 Q8N7P7 452 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 TSPAN14Q8NG11 270 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 C22orf15Q8WYQ4 148 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 LHX4Q969G2 390 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 MS4A7Q9GZW8 240 aaPredicted RBP11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 GHRLQ9UBU3 117 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 ZNF69Q9UC07 566 aa11.93□□□□□ -0.5
SQSTM1-205ENST00000464493 DSCAML1Q8TD84 2053 aa11.92□□□□□ -0.5
SQSTM1-205ENST00000464493 TRAV24A0A0B4J272 114 aa11.92□□□□□ -0.5
SQSTM1-205ENST00000464493 CENPVL3A0A0U1RRI6 287 aa11.92□□□□□ -0.5
SQSTM1-205ENST00000464493 ERP29P30040 261 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-205ENST00000464493 RBM11P57052 281 aaKnown RBP11.92□□□□□ -0.5
SQSTM1-205ENST00000464493 BPIFB3P59826 476 aa11.92□□□□□ -0.5
SQSTM1-205ENST00000464493 C1orf100Q5SVJ3 147 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 112.1 ms