RNA–Protein interactions for RNA: ENST00000463622.6

SCFD1-204, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 1,943 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-204ENST00000463622 GBX2P52951 348 aaPredicted RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 OR10A3P58181 314 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 PPP1CBP62140 327 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 ACTA2P62736 377 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 GRB2P62993 217 aaKnown RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 ACTG2P63267 376 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 FAM3AP98173 230 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 TGFBR3Q03167 851 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 PSG7Q13046 419 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 PLA2G7Q13093 441 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 SNTB2Q13425 540 aaKnown RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 SPCS2Q15005 226 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 TAF13Q15543 124 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 BCL2L15Q5TBC7 163 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 C22orf42Q6IC83 251 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 OR2T2Q6IF00 324 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 LIN54Q6MZP7 749 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 KCTD18Q6PI47 426 aaPredicted RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 DEGS2Q6QHC5 323 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 DRAM2Q6UX65 266 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 Q6ZSR3 168 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 RTN4RL2Q86UN3 420 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 CLVS1Q8IUQ0 354 aaPredicted RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 BHLHE23Q8NDY6 225 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 DNAAF1Q8NEP3 725 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 OR56B2PQ8NGI1 322 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 OR1J1Q8NGS3 322 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 NDNFQ8TB73 568 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF418Q8TF45 676 aaPredicted RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 MUCL1Q96DR8 90 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 REEP6Q96HR9 211 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 PGAM5Q96HS1 289 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 SPACA5Q96QH8 159 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 KCNS3Q9BQ31 491 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 CHCHD6Q9BRQ6 235 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 MRPL37Q9BZE1 423 aaKnown RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 BPESC1Q9GZL8 116 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 METTL17Q9H7H0 456 aaPredicted RBP3□□□□□ -1.93
SCFD1-204ENST00000463622 NIPAL2Q9H841 368 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 NDUFB11Q9NX14 153 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 DCAF16Q9NXF7 216 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 TAS2R4Q9NYW5 299 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 TMEM14AQ9Y6G1 99 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 V9GYS6 101 aa3□□□□□ -1.93
SCFD1-204ENST00000463622 LOC100506127A0A0U1RQW1 187 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 IQCMA0A1B0GVH7 501 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 A0A1W2PPW3 197 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ZSCAN5BA6NJL1 495 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 H3BMQ9 156 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 MLNRO43193 412 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF254O75437 659 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 HLA-DPB1P04440 258 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 IGFBP3P17936 291 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 DCTDP32321 178 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 GUCA1AP43080 201 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ALDH3B1P43353 468 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 RPL5P46777 297 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 UCP2P55851 309 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ERVFC1-1P60608 527 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 PCBD1P61457 104 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 VBP1P61758 197 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 BDH1Q02338 343 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 OR8B8Q15620 311 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 UBE2V2Q15819 145 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ADIPOQQ15848 244 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 TBC1D28Q2M2D7 210 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF829Q3KNS6 432 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ACSM3Q53FZ2 586 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 FAM76BQ5HYJ3 339 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 C1QTNF12Q5T7M4 302 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 RPL22L1Q6P5R6 122 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CD200R1LQ6Q8B3 271 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 SLC22A25Q6T423 547 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 UNQ9370/PRO34162Q6UXP9 181 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 TMPRSS11AQ6ZMR5 421 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 FAM220AQ7Z4H9 259 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF329Q86UD4 541 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 LRRTM1Q86UE6 522 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 LYPD6Q86Y78 171 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 HIST2H2ABQ8IUE6 130 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 BATF2Q8N1L9 274 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF676Q8N7Q3 588 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ZDHHC22Q8N966 263 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 OR13C9Q8NGT0 318 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 OR5AK2Q8NH90 309 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 KLF14Q8TD94 323 aaPredicted RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 NPRL2Q8WTW4 380 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 HPSE2Q8WWQ2 592 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 UFD1Q92890 307 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 FGGYQ96C11 551 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CMBLQ96DG6 245 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 DERL3Q96Q80 235 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 BARHL1Q9BZE3 327 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 CDH20Q9HBT6 801 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ISYNA1Q9NPH2 558 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 NOX4Q9NPH5 578 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 GPR173Q9NS66 373 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 TXNL4BQ9NX01 149 aaKnown RBP2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ZNF581Q9P0T4 197 aa2.99□□□□□ -1.93
SCFD1-204ENST00000463622 ATPIF1Q9UII2 106 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 109.9 ms