RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 LINC00337Q8N6G1 96 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 ATP6V1C2Q8NEY4 427 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 OR2Y1Q8NGV0 311 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 KLF14Q8TD94 323 aaPredicted RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 C2orf15Q8WU43 125 aaKnown RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 GTF2H4Q92759 462 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 CCDC127Q96BQ5 260 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 ZBED3Q96IU2 234 aaPredicted RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 SEC22CQ9BRL7 303 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 THTPAQ9BU02 230 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 ULBP1Q9BZM6 244 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 OR52A5Q9H2C5 316 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 LINC00574Q9H8X3 128 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 MAT2BQ9NZL9 334 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 C14orf166Q9Y224 244 aaKnown RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 ZNF706Q9Y5V0 76 aaPredicted RBP1.82□□□□□ -2.12
VCL-203ENST00000461383 GMEB1Q9Y692 573 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 ABCB11O95342 1321 aa1.82□□□□□ -2.12
VCL-203ENST00000461383 YLPM1P49750 1951 aaKnown RBP1.81□□□□□ -2.12
VCL-203ENST00000461383 IZUMO1RA6ND01 250 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 A8MUU9 505 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 CDIPTO14735 213 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 SGCEO43556 437 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 ENTPD6O75354 484 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 KRTAP5-8O75690 187 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 IGKV5-2P06315 115 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 SOD3P08294 240 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 CECR9P0C854 216 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 SLC2A1P11166 492 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 MAGEA6P43360 314 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 CBX5P45973 191 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 LGALS7P47929 136 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 AQP5P55064 265 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 OR2B6P58173 313 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 CD164Q04900 197 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 BIKQ13323 160 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 TMEM241Q24JQ0 296 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 NXNL2Q5VZ03 156 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 FAM104BQ5XKR9 115 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 ZNF470Q6ECI4 717 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 TBPL2Q6SJ96 375 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 USP50Q70EL3 339 aaPredicted RBP1.81□□□□□ -2.12
VCL-203ENST00000461383 SELENOHQ8IZQ5 122 aaKnown RBP1.81□□□□□ -2.12
VCL-203ENST00000461383 ZNF680Q8NEM1 530 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 ZNF555Q8NEP9 628 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 OR8A1Q8NGG7 326 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 ANGPTL6Q8NI99 470 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 CASTOR1Q8WTX7 329 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 OR5P2Q8WZ92 322 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 CCL17Q92583 94 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 YIPF5Q969M3 257 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 LRRC45Q96CN5 670 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 BIRC8Q96P09 236 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 TRNT1Q96Q11 434 aaKnown RBP1.81□□□□□ -2.12
VCL-203ENST00000461383 PEBP4Q96S96 227 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 TAPBPLQ9BX59 468 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 LHX5Q9H2C1 402 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 RDH14Q9HBH5 336 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 SPACA1Q9HBV2 294 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 TAS2R13Q9NYV9 303 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 SNX24Q9Y343 169 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 PIK3R4Q99570 1358 aa1.81□□□□□ -2.12
VCL-203ENST00000461383 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 IGHV3OR16-8A0A075B7F1 116 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 TRAV8-3A0A0A6YYJ7 113 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 TRAV8-2A0A0B4J237 113 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 PGPA6NDG6 321 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 K7ERS5 55 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 M0QXV9 152 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 RTL8CO15255 209 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 GYG2O15488 501 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 KCNK2O95069 426 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 IGLV3-19P01714 112 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 OR5AC1P0C628 307 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 SLC35E2BP0CK96 405 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 SPNP16150 400 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 ATF1P18846 271 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 M6PRP20645 277 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 ELK4P28324 431 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 TEAD1P28347 426 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 FLI1Q01543 452 aaPredicted RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 PRDX1Q06830 199 aaKnown RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 PMS2P3Q13401 168 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 RAB31Q13636 194 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 OR10J3Q5JRS4 329 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 MRPL2Q5T653 305 aaKnown RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 LAMTOR1Q6IAA8 161 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 C16orf47Q6ZP98 133 aaPredicted RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 DGAT2L6Q6ZPD8 337 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 TPGS1Q6ZTW0 290 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 NT5DC3Q86UY8 548 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 CRLF3Q8IUI8 442 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 ACBD4Q8NC06 268 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 ZNF738Q8NE65 137 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 PHF10Q8WUB8 498 aaKnown RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 CCDC12Q8WUD4 166 aaPredicted RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 PDCD6IPQ8WUM4 868 aaKnown RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 ITLN2Q8WWU7 325 aaPredicted RBP1.8□□□□□ -2.12
VCL-203ENST00000461383 TNFRSF14Q92956 283 aa1.8□□□□□ -2.12
VCL-203ENST00000461383 PPWD1Q96BP3 646 aaKnown RBP1.8□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 104.4 ms