RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 EPOPA6NHQ4 379 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 HMGB3O15347 200 aaKnown RBP12.64□□□□□ -0.39
NCL-207ENST00000461347 RAMP1O60894 148 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 SRFP11831 508 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 PPP1CCP36873 323 aaKnown RBP12.64□□□□□ -0.39
NCL-207ENST00000461347 GPM6AP51674 278 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 UBE2NP61088 152 aaKnown RBP12.64□□□□□ -0.39
NCL-207ENST00000461347 TMEM267Q0VDI3 215 aaPredicted RBP12.64□□□□□ -0.39
NCL-207ENST00000461347 BIVMQ86UB2 503 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 SLC35G3Q8N808 338 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 ADPRHL1Q8NDY3 354 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 DNAJC13O75165 2243 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 A0A1W2PPV4 95 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 AQP7P3A6NL99 342 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 PPP5D1E7EU14 171 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 FAM166AQ6J272 317 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 UBAC2Q8NBM4 344 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 OR56B2PQ8NGI1 322 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 FAM117AQ9C073 453 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 BTBD17A6NE02 478 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 TRAF3IP2O43734 574 aaPredicted RBP12.64□□□□□ -0.39
NCL-207ENST00000461347 PPYP01298 95 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 UBE2V2Q15819 145 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 ZNF528Q3MIS6 628 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 OR2M3Q8NG83 312 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 GPHA2Q96T91 129 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 PRO1933Q9H354 126 aa12.64□□□□□ -0.39
NCL-207ENST00000461347 ZNF732B4DXR9 585 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 SERPINA7P05543 415 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 CTXN2P0C2S0 81 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 HLA-GP17693 338 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 DYNLT3P51808 116 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 DSCR4P56555 118 aaPredicted RBP12.63□□□□□ -0.39
NCL-207ENST00000461347 RUNX1Q01196 453 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 MSMO1Q15800 293 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 CSRP2Q16527 193 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 WIPI1Q5MNZ9 446 aaPredicted RBP12.63□□□□□ -0.39
NCL-207ENST00000461347 FAM185AQ8N0U4 392 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 INTS12Q96CB8 462 aaKnown RBP12.63□□□□□ -0.39
NCL-207ENST00000461347 SH3BGRL3Q9H299 93 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 PTPRZ1P23471 2315 aaPredicted RBP12.63□□□□□ -0.39
NCL-207ENST00000461347 H3BQ15 152 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 ZNF501Q96CX3 271 aaPredicted RBP12.63□□□□□ -0.39
NCL-207ENST00000461347 BOKQ9UMX3 212 aaPredicted RBP12.63□□□□□ -0.39
NCL-207ENST00000461347 LAMP3Q9UQV4 416 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 DEGS1O15121 323 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 MPPED1O15442 326 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 CBR3O75828 277 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 RNF224P0DH78 156 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 CCL2P13500 99 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 PSMB3P49720 205 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 TBC1D26Q86UD7 250 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 TMEM230Q96A57 120 aa12.63□□□□□ -0.39
NCL-207ENST00000461347 RTBDNQ9BSG5 229 aaPredicted RBP12.63□□□□□ -0.39
NCL-207ENST00000461347 A0A1W2PPQ1 181 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 NPIPB7O75200 414 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 NXPH2O95156 264 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 FCGR3AP08637 254 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 FGF8P55075 233 aaPredicted RBP12.62□□□□□ -0.39
NCL-207ENST00000461347 CLDN15P56746 228 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 MESP1Q9BRJ9 268 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 CLEC1BQ9P126 229 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 SCGB1D1O95968 90 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 IGHMP01871 453 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 METTL15P1P0C7V9 234 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 DLK1P80370 383 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 ZNF154Q13106 437 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 BATFQ16520 125 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 SLC25A47Q6Q0C1 308 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 VASH2Q86V25 355 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 ESRP2Q9H6T0 727 aaKnown RBP12.62□□□□□ -0.39
NCL-207ENST00000461347 UCK1Q9HA47 277 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 PSENENQ9NZ42 101 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 FAM166BA8MTA8 275 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 FGF16O43320 207 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 CHST1O43916 411 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 CYB561P49447 251 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 RPS16P62249 146 aaKnown RBP12.62□□□□□ -0.39
NCL-207ENST00000461347 PMP22Q01453 160 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 RNF144BQ7Z419 303 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 ENY2Q9NPA8 101 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 PISDQ9UG56 409 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 IGKV3D-11A0A0A0MRZ8 115 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 SIRPB1O00241 398 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 ZNHIT1O43257 154 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 RAB4BP61018 213 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 Q3ZCU0 254 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 ZNF808Q8N4W9 903 aaPredicted RBP12.62□□□□□ -0.39
NCL-207ENST00000461347 FAM210BQ96KR6 192 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 C12orf49Q9H741 205 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
NCL-207ENST00000461347 OSGIN2Q9Y236 505 aa12.62□□□□□ -0.39
NCL-207ENST00000461347 ICE1Q9Y2F5 2266 aa12.61□□□□□ -0.39
NCL-207ENST00000461347 FANCMQ8IYD8 2048 aa12.61□□□□□ -0.39
NCL-207ENST00000461347 PRF1P14222 555 aa12.61□□□□□ -0.39
NCL-207ENST00000461347 KLK2P20151 261 aa12.61□□□□□ -0.39
NCL-207ENST00000461347 CD200P41217 278 aa12.61□□□□□ -0.39
NCL-207ENST00000461347 LINC00696Q6ZRV3 163 aa12.61□□□□□ -0.39
NCL-207ENST00000461347 ZDHHC23Q8IYP9 409 aa12.61□□□□□ -0.39
NCL-207ENST00000461347 OR52M1Q8NGK5 317 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 36.2 ms