RNA–Protein interactions for RNA: ENST00000460928.1

ATPAF1-203, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 869 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-203ENST00000460928 CA5BP1Q8WTZ4 195 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 CANT1Q8WVQ1 401 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 RND1Q92730 232 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 CMBLQ96DG6 245 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 INTS14Q96SY0 518 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ATP6V0BQ99437 205 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 GFI1Q99684 422 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ARHGDIGQ99819 225 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 C7orf50Q9BRJ6 194 aaKnown RBP4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 GINS4Q9BRT9 223 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF426Q9BUY5 554 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 MMP28Q9H239 520 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 SMCO4Q9NRQ5 59 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM118AQ9NWS6 357 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 VNN3Q9NY84 501 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 B4GALT7Q9UBV7 327 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ANGPT4Q9Y264 503 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 ORC6Q9Y5N6 252 aa4.13□□□□□ -1.75
ATPAF1-203ENST00000460928 HRNRQ86YZ3 2850 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 TACC2O95359 2948 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 NCOA6Q14686 2063 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CADP27708 2225 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 IGKV1D-42A0A075B6H8 117 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 TMED7-TICAM2A0A0A6YYA0 188 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 MEX3AA1L020 520 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM90A10PA6NDY2 464 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ANXA2P2A6NMY6 339 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 HMSDA8MTL9 139 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 SEC14L6B5MCN3 397 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 J3QR06 171 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CCL21O00585 134 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 BHLHE40O14503 412 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 FFAR1O14842 300 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 TIMM23O14925 209 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 LYRM1O43325 122 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 XPNPEP2O43895 674 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 EIF4E2O60573 245 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CYTIPO60759 359 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 FMO6PO60774 539 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 PRAF2O60831 178 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 KHDRBS3O75525 346 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 WBP4O75554 376 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 FADS2O95864 444 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CD2P06729 351 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CRYGCP07315 174 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 MELTFP08582 738 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 UBBP0CG47 229 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 UBCP0CG48 685 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 SULT1A3P0DMM9 295 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 SULT1A4P0DMN0 295 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 SCGB1A1P11684 91 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF708P17019 499 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 FGF7P21781 194 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CD1BP29016 333 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CCKARP32238 428 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 GGT2P36268 569 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACTBP60709 375 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CDC42P60953 191 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACTA2P62736 377 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 RPS27AP62979 156 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 UBA52P62987 128 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACTG1P63261 375 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACTG2P63267 376 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACTC1P68032 377 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACTA1P68133 377 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 LTBQ06643 244 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CD47Q08722 323 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 RBBP4Q09028 425 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 OR1Q1Q15612 314 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 HMGN3Q15651 99 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ZNF79Q15937 498 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CTU2Q2VPK5 515 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 MOGAT2Q3SYC2 334 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACSF3Q4G176 576 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 FAM74A1Q5RGS3 127 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 C10orf25Q5T742 122 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 TRIQKQ629K1 86 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 EIF5AL1Q6IS14 154 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 KCTD18Q6PI47 426 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 TBPL2Q6SJ96 375 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ATRAIDQ6UW56 229 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CASP12Q6UXS9 341 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 Q6ZSV7 163 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 LRRC28Q86X40 367 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 FOXRED2Q8IWF2 684 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 GTPBP8Q8N3Z3 284 aaPredicted RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACBD7Q8N6N7 88 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 CLDN22Q8N7P3 220 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 PXT1Q8NFP0 134 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 OR52E4Q8NGH9 312 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 OR10D3Q8NH80 312 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 OR1S1Q8NH92 325 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 TERB2Q8NHR7 220 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 THAP6Q8TBB0 222 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 FNDC9Q8TBE3 224 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 TRMT10AQ8TBZ6 339 aaKnown RBP4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 RXFP4Q8TDU9 374 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 ACOT12Q8WYK0 555 aa4.12□□□□□ -1.75
ATPAF1-203ENST00000460928 SMIM12Q96EX1 92 aa4.12□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 62 ms