RNA–Protein interactions for RNA: ENST00000460822.1

HPS3-203, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 1,958 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-203ENST00000460822 IMP3Q9NV31 184 aaKnown RBP2.12□□□□□ -2.07
HPS3-203ENST00000460822 ARMC1Q9NVT9 282 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 NYAP2Q9P242 653 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 UBIAD1Q9Y5Z9 338 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 SBF1O95248 1867 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 ZNF236Q9UL36 1845 aa2.12□□□□□ -2.07
HPS3-203ENST00000460822 GOLGB1Q14789 3259 aaKnown RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 LCTP09848 1927 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 UBR3Q6ZT12 1888 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 ANKRD31Q8N7Z5 1873 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 A0A1B0GTI1 187 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 CLDN34H7C241 214 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 SULT1C2O00338 296 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 KMOO15229 486 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 MYO1DO94832 1006 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 KLF8O95600 359 aaPredicted RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 MIPP30301 263 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 RPL14P50914 215 aaKnown RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 IGLV3-21P80748 117 aaPredicted RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 RPL18AQ02543 176 aaKnown RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 NAB1Q13506 487 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 SPCS2Q15005 226 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 PDK2Q15119 407 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 PON3Q15166 354 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 QPRTQ15274 297 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 GUCA2BQ16661 112 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 RFX4Q33E94 735 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 FAM27D1Q5T7N8 215 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 XAF1Q6GPH4 301 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 ZNF773Q6PK81 442 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 TPGS1Q6ZTW0 290 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 FAM19A1Q7Z5A9 133 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 NPWQ8N729 165 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 TMEM35BQ8NCS4 154 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 CCDC54Q8NEL0 328 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 BPIFB6Q8NFQ5 453 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 OR10AD1Q8NGE0 317 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 CANT1Q8WVQ1 401 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 CYGBQ8WWM9 190 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 RORBQ92753 470 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 LRRC58Q96CX6 371 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 AURKBQ96GD4 344 aaPredicted RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 RNF157Q96PX1 679 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 C9orf16Q9BUW7 83 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 YTHDF1Q9BYJ9 559 aaKnown RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 POTEKPQ9BYX7 375 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 ACOT13Q9NPJ3 140 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 MRPL40Q9NQ50 206 aaKnown RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 IFT46Q9NQC8 304 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 SDHAF3Q9NRP4 125 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 HEBP2Q9Y5Z4 205 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 F11RQ9Y624 299 aaKnown RBP2.11□□□□□ -2.07
HPS3-203ENST00000460822 LTBP4Q8N2S1 1624 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 THSD7BQ9C0I4 1608 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 ZSWIM8A7E2V4 1837 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 SCN1AP35498 2009 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 MICAL3Q7RTP6 2002 aa2.11□□□□□ -2.07
HPS3-203ENST00000460822 A0A0A6YYH2 397 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 LOC105371267A0A1B0GV96 52 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 DHRS12A0PJE2 317 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 A6NJ64 397 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 SYCE1LA8MT33 242 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 H7C417 338 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 PHOX2AO14813 284 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 SLC22A1O15245 554 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 ACOX3O15254 700 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 TOX3O15405 576 aaPredicted RBP2.1□□□□□ -2.07
HPS3-203ENST00000460822 UGT2B11O75310 529 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 KRT75O95678 551 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 ASS1P00966 412 aaKnown RBP2.1□□□□□ -2.07
HPS3-203ENST00000460822 RETP07949 1114 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 GIMD1P0DJR0 217 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 SMIM10L1P0DMW3 83 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 MLNP12872 115 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 ZBTB25P24278 435 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 ELK4P28324 431 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 HTR1EP28566 365 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 GALR1P47211 349 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 ACOT2P49753 483 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 RGS6P49758 472 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 NKX2-5P52952 324 aaPredicted RBP2.1□□□□□ -2.07
HPS3-203ENST00000460822 PPP1CBP62140 327 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 CRADDP78560 199 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 PRR3P79522 188 aaKnown RBP2.1□□□□□ -2.07
HPS3-203ENST00000460822 MRPS15P82914 257 aaKnown RBP2.1□□□□□ -2.07
HPS3-203ENST00000460822 CDC20Q12834 499 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 STX4Q12846 297 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 DMC1Q14565 340 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 GUSBP1Q15486 140 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 BSXQ3C1V8 233 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 COA6Q5JTJ3 125 aaKnown RBP2.1□□□□□ -2.07
HPS3-203ENST00000460822 FAM45BPQ6NSW5 357 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 C4orf22Q6V702 233 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 TEX43Q6ZNM6 134 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 LINC00299Q6ZSB3 139 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 SMIM5Q71RC9 77 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 SSX7Q7RTT5 188 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 AKAP14Q86UN6 197 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 DHFR2Q86XF0 187 aa2.1□□□□□ -2.07
HPS3-203ENST00000460822 SLC30A8Q8IWU4 369 aa2.1□□□□□ -2.07
Retrieved 100 of 20,778 RNA–protein pairs in 194 ms