RNA–Protein interactions for RNA: ENST00000460064.1

CCDC50-203, Transcript of coiled-coil domain containing 50, humanhuman

TSL 2

Gene CCDC50, Length 420 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-203ENST00000460064 FAHD1Q6P587 224 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 HMGN2P46Q86SG4 172 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 ZFP82Q8N141 532 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 OR4M2Q8NGB6 313 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 RNASEH2CQ8TDP1 164 aaKnown RBP3.15□□□□□ -1.91
CCDC50-203ENST00000460064 HGDQ93099 445 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 CEP19Q96LK0 163 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 PORCNQ9H237 461 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 OR51B5Q9H339 312 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 HRASLSQ9HDD0 168 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 VCX3AQ9NNX9 186 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 NLE1Q9NVX2 485 aaPredicted RBP3.15□□□□□ -1.91
CCDC50-203ENST00000460064 C1orf109Q9NX04 203 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 CYB5R1Q9UHQ9 305 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 SLC22A13Q9Y226 551 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 ZFYVE9O95405 1425 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 DOCK8Q8NF50 2099 aa3.15□□□□□ -1.91
CCDC50-203ENST00000460064 CPDO75976 1380 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 IGHV2OR16-5A0A0B4J2B6 119 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 TVP23AA6NH52 213 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 RPL36A-HNRNPH2H7BZ11 118 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 CCDC22O60826 627 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 IGLV2-8P01709 118 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 SLC36A2Q495M3 483 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 IDNKQ5T6J7 187 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 UNQ9165/PRO28630Q6UXU0 137 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 AHSA2Q719I0 299 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 Q8N402 240 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 ZNF561Q8N587 486 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 RNF182Q8N6D2 247 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 OR4K2Q8NGD2 314 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 OR51A7Q8NH64 312 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 RORBQ92753 470 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 TSNAXQ99598 290 aaKnown RBP3.14□□□□□ -1.91
CCDC50-203ENST00000460064 PRRT1Q99946 306 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 LHX5Q9H2C1 402 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 C6orf50Q9HD87 102 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 BABAM2Q9NXR7 383 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 MMACHCQ9Y4U1 282 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 KLF12Q9Y4X4 402 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 POLR3HQ9Y535 204 aaPredicted RBP3.14□□□□□ -1.91
CCDC50-203ENST00000460064 V9GYQ6 96 aa3.14□□□□□ -1.91
CCDC50-203ENST00000460064 YEATS2Q9ULM3 1422 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 TRAV8-4A0A0B4J246 113 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 ISPDA4D126 451 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 SULT1C2O00338 296 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 P01737 135 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 TCRBP04435 133 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 GNRHRP30968 328 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 TGFBR2P37173 567 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 RPL31P62899 125 aaKnown RBP3.13□□□□□ -1.91
CCDC50-203ENST00000460064 CCL7P80098 99 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 LY6EQ16553 131 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 FAM222AQ5U5X8 452 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 SYPL2Q5VXT5 272 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 SLC25A34Q6PIV7 304 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 TMEM251Q8N6I4 163 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 LRRC52Q8N7C0 313 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 TMEM105Q8N8V8 129 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 OR5B17Q8NGF7 314 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 DEDD2Q8WXF8 326 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 YIPF6Q96EC8 236 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 ZNF2Q9BSG1 426 aaPredicted RBP3.13□□□□□ -1.91
CCDC50-203ENST00000460064 MARVELD1Q9BSK0 173 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 ZNF717Q9BY31 904 aaPredicted RBP3.13□□□□□ -1.91
CCDC50-203ENST00000460064 C19orf12Q9NSK7 152 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 VAX2Q9UIW0 290 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 ZNF337Q9Y3M9 751 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 BRWD3Q6RI45 1802 aa3.13□□□□□ -1.91
CCDC50-203ENST00000460064 COL27A1Q8IZC6 1860 aaPredicted RBP3.13□□□□□ -1.91
CCDC50-203ENST00000460064 USP42Q9H9J4 1324 aaKnown RBP3.13□□□□□ -1.91
CCDC50-203ENST00000460064 SMARCA2P51531 1590 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 CCL15-CCL14A0A0B4J2E2 113 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 IGKV6-21A0A0C4DH24 114 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 IGHV1-3A0A0C4DH29 117 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 H0Y980 276 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 hCG_2039718K7EN88 272 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 FGF16O43320 207 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 ATP8B1O43520 1251 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 RHOCP08134 193 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 MMP7P09237 267 aaPredicted RBP3.12□□□□□ -1.91
CCDC50-203ENST00000460064 OCM2P0CE71 109 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 MAGEA3P43357 314 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 GALR1P47211 349 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 IDH2P48735 452 aaKnown RBP3.12□□□□□ -1.91
CCDC50-203ENST00000460064 ERFP50548 548 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 CMC4P56277 68 aaPredicted RBP3.12□□□□□ -1.91
CCDC50-203ENST00000460064 SPCS3P61009 180 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 PPP1CAP62136 330 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 STX4Q12846 297 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 CCL15Q16663 113 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 GUK1Q16774 197 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 ACTL10Q5JWF8 245 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 RBM48Q5RL73 367 aaKnown RBP3.12□□□□□ -1.91
CCDC50-203ENST00000460064 FAM27D1Q5T7N8 215 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 RESP18Q5W5W9 173 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 S100A7AQ86SG5 101 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 SLC51BQ86UW2 128 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 AP3S1Q92572 193 aa3.12□□□□□ -1.91
CCDC50-203ENST00000460064 PTH2Q96A98 100 aa3.12□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms