RNA–Protein interactions for RNA: ENST00000459947.5

UBR4-208, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 2

Gene UBR4, Length 3,873 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-208ENST00000459947 CD37P11049 281 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 SEC61A1P61619 476 aaKnown RBP8.86□□□□□ -0.99
UBR4-208ENST00000459947 RBMS3Q6XE24 437 aaKnown RBP8.86□□□□□ -0.99
UBR4-208ENST00000459947 BPIFB2Q8N4F0 458 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 TSPAN14Q8NG11 270 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 KCNG3Q8TAE7 436 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 ZFAND2BQ8WV99 257 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 ZNF488Q96MN9 340 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 METTL8Q9H825 291 aaKnown RBP8.86□□□□□ -0.99
UBR4-208ENST00000459947 TAS2R3Q9NYW6 316 aa8.86□□□□□ -0.99
UBR4-208ENST00000459947 ZNF44P15621 663 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 GABRR1P24046 479 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 FGF9P31371 208 aaPredicted RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 RPS25P62851 125 aaKnown RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 RPL31P62899 125 aaKnown RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 TRAT1Q6PIZ9 186 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 FAM185AQ8N0U4 392 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 GAL3ST2Q9H3Q3 398 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 RBFOX1Q9NWB1 397 aaKnown RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 OR6C3Q9NZP0 311 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 SF3B6Q9Y3B4 125 aaKnown RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 LINC00312Q9Y6C7 94 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 POM121CA8CG34 1229 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 ZNF737O75373 536 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 RBM11P57052 281 aaKnown RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 GRK1Q15835 563 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 OR52W1Q6IF63 320 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 Q71RC1 249 aaPredicted RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 OR5T2Q8NGG2 359 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 URM1Q9BTM9 101 aaKnown RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 SIRPDQ9H106 197 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 PIN1P1O15428 100 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 ANGPTL7O43827 346 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 MAS1P04201 325 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 JUNBP17275 347 aaPredicted RBP8.85□□□□□ -0.99
UBR4-208ENST00000459947 AMY2BP19961 511 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 EPHA1P21709 976 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 SGCDQ92629 289 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 MUL1Q969V5 352 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 BARHL1Q9BZE3 327 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 ONECUT1Q9UBC0 465 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 OPN4Q9UHM6 478 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 HIVEP2P31629 2446 aa8.85□□□□□ -0.99
UBR4-208ENST00000459947 TRAV8-7A0A075B6U6 113 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 SLC17A2O00624 439 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 CFPP27918 469 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 RAB11BQ15907 218 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 GLIPR1L1Q6UWM5 242 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 LRRTM1Q86UE6 522 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 CROCCP3Q8IVE0 287 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 OR5D18Q8NGL1 313 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 MS4A7Q9GZW8 240 aaPredicted RBP8.84□□□□□ -0.99
UBR4-208ENST00000459947 ABCA1O95477 2261 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 DCHS2Q6V1P9 2916 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 TRGV10A0A0A0MS01 117 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 IGKV1-12A0A0C4DH73 117 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 OR2H2O95918 312 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 IGKV1D-12P01611 117 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 PRTN3P24158 256 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 HTR2CP28335 458 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 P2RX3P56373 397 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 ARL6IP1Q15041 203 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 PAN3Q58A45 887 aaKnown RBP8.84□□□□□ -0.99
UBR4-208ENST00000459947 OR10A7Q8NGE5 316 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 MMP26Q9NRE1 261 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 FBLN5Q9UBX5 448 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 TEX15Q9BXT5 2789 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 SCGNO76038 276 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 OR3A4PP47883 348 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 ASPHD2Q6ICH7 369 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 CORO2AQ92828 525 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 SPACA5Q96QH8 159 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 PLGRKTQ9HBL7 147 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 V9GY05 133 aa8.84□□□□□ -0.99
UBR4-208ENST00000459947 TCF21O43680 179 aa8.83□□□□□ -1
UBR4-208ENST00000459947 NPBWR2P48146 333 aa8.83□□□□□ -1
UBR4-208ENST00000459947 SCAND1P57086 179 aa8.83□□□□□ -1
UBR4-208ENST00000459947 ST3GAL6Q9Y274 331 aa8.83□□□□□ -1
UBR4-208ENST00000459947 TRIM64CA6NLI5 447 aa8.83□□□□□ -1
UBR4-208ENST00000459947 SLC22A1O15245 554 aa8.83□□□□□ -1
UBR4-208ENST00000459947 HOXB4P17483 251 aaPredicted RBP8.83□□□□□ -1
UBR4-208ENST00000459947 Q6P435 159 aa8.83□□□□□ -1
UBR4-208ENST00000459947 TMEM91Q6ZNR0 172 aa8.83□□□□□ -1
UBR4-208ENST00000459947 RTN4RL2Q86UN3 420 aa8.83□□□□□ -1
UBR4-208ENST00000459947 TMEM86BQ8N661 226 aa8.83□□□□□ -1
UBR4-208ENST00000459947 ZNRF1Q8ND25 227 aa8.83□□□□□ -1
UBR4-208ENST00000459947 OR13D1Q8NGV5 346 aa8.83□□□□□ -1
UBR4-208ENST00000459947 ZNF714Q96N38 554 aa8.83□□□□□ -1
UBR4-208ENST00000459947 ZNF729A6NN14 1252 aaPredicted RBP8.83□□□□□ -1
UBR4-208ENST00000459947 SIRPB1O00241 398 aa8.83□□□□□ -1
UBR4-208ENST00000459947 SFTPBP07988 381 aa8.83□□□□□ -1
UBR4-208ENST00000459947 SERPINA2P20848 420 aa8.83□□□□□ -1
UBR4-208ENST00000459947 SSX1Q16384 188 aa8.83□□□□□ -1
UBR4-208ENST00000459947 DMRTC1Q5HYR2 192 aa8.83□□□□□ -1
UBR4-208ENST00000459947 SLC16A12Q6ZSM3 486 aa8.83□□□□□ -1
UBR4-208ENST00000459947 ZNF554Q86TJ5 538 aa8.83□□□□□ -1
UBR4-208ENST00000459947 KCTD7Q96MP8 289 aa8.83□□□□□ -1
UBR4-208ENST00000459947 MGAT4AQ9UM21 535 aa8.83□□□□□ -1
UBR4-208ENST00000459947 FLNAP21333 2647 aaKnown RBP8.83□□□□□ -1
UBR4-208ENST00000459947 TMEM82A0PJX8 343 aa8.82□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms