RNA–Protein interactions for RNA: ENST00000459895.1

COL18A1-206, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 3

Gene COL18A1, Length 588 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-206ENST00000459895 EDDM3AQ14507 147 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 IL13RA2Q14627 380 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 PDCD1Q15116 288 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 P2RY14Q15391 338 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 NHLRC3Q5JS37 347 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 C1orf100Q5SVJ3 147 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 GLT8D1Q68CQ7 371 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 Q6P435 159 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 BTNL3Q6UXE8 466 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 TCF23Q7RTU1 214 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 NR2C2APQ86WQ0 139 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 FAM185AQ8N0U4 392 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 OR8H2Q8N162 312 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 OSR2Q8N2R0 312 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 TMEM104Q8NE00 496 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 Q8NFD4 153 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 OR51T1Q8NGJ9 327 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 OR6M1Q8NGM8 313 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 C8orf46Q8TAG6 207 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 FAM46BQ96A09 425 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 YIPF6Q96EC8 236 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 CYYR1Q96J86 154 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 S100A13Q99584 98 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 MRPS26Q9BYN8 205 aaKnown RBP10.59□□□□□ -0.71
COL18A1-206ENST00000459895 SHARPINQ9H0F6 387 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 FAM234AQ9H0X4 552 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 PPA2Q9H2U2 334 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 RNF167Q9H6Y7 350 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 ONECUT1Q9UBC0 465 aa10.59□□□□□ -0.71
COL18A1-206ENST00000459895 TRAV1-2A0A0B4J238 106 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 TRAV40A0A0B4J280 105 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 A0A1W2PQ09 198 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 MEX3AA1L020 520 aaKnown RBP10.58□□□□□ -0.72
COL18A1-206ENST00000459895 MEGF11A6BM72 1044 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 K7N7A8 449 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 SLC33A1O00400 549 aaPredicted RBP10.58□□□□□ -0.72
COL18A1-206ENST00000459895 SLC17A2O00624 439 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 CRLF1O75462 422 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 CSTBP04080 98 aaKnown RBP10.58□□□□□ -0.72
COL18A1-206ENST00000459895 CHRM2P08172 466 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 MGMTP16455 207 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 HTR2CP28335 458 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 FGF9P31371 208 aaPredicted RBP10.58□□□□□ -0.72
COL18A1-206ENST00000459895 UNC119Q13432 240 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 ZNF273Q14593 569 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 ATXN7L3Q14CW9 347 aaPredicted RBP10.58□□□□□ -0.72
COL18A1-206ENST00000459895 GRK1Q15835 563 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 CD276Q5ZPR3 534 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 METAP1DQ6UB28 335 aaPredicted RBP10.58□□□□□ -0.72
COL18A1-206ENST00000459895 TPRX1Q8N7U7 411 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 LY6G5BQ8NDX9 201 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 OR4S1Q8NGB4 309 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 OR4M1Q8NGD0 313 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 CENPOQ9BU64 300 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 MRI1Q9BV20 369 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 SIRPDQ9H106 197 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 BANF2Q9H503 90 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 C7orf69Q9H7B7 122 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 SEBOXQ9HB31 216 aaPredicted RBP10.58□□□□□ -0.72
COL18A1-206ENST00000459895 PLGRKTQ9HBL7 147 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 LPAR3Q9UBY5 353 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 CDC42EP3Q9UKI2 254 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 ST3GAL6Q9Y274 331 aa10.58□□□□□ -0.72
COL18A1-206ENST00000459895 TRBV23-1A0A0A0MS06 115 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 TRAV24A0A0B4J272 114 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 A0A0G2JK05 382 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 KIR2DS1A0A191URI9 304 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 SH2D1BO14796 132 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 GEMIN2O14893 280 aaKnown RBP10.57□□□□□ -0.72
COL18A1-206ENST00000459895 GPR37O15354 613 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 ZNF780AO75290 641 aaPredicted RBP10.57□□□□□ -0.72
COL18A1-206ENST00000459895 CRTAPO75718 401 aaPredicted RBP10.57□□□□□ -0.72
COL18A1-206ENST00000459895 ECDO95905 644 aaPredicted RBP10.57□□□□□ -0.72
COL18A1-206ENST00000459895 PPIAL4GP0DN37 164 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 VSIG8P0DPA2 414 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 CD37P11049 281 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 MMP9P14780 707 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 TGFBR1P36897 503 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 DLX1P56177 255 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 CLDN12P56749 244 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 EDDM3BP56851 147 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 PAX8Q06710 450 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 SCN1BQ07699 218 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 RAB11BQ15907 218 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 CHRFAM7AQ494W8 412 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 HES5Q5TA89 166 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 OR10K2Q6IF99 312 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 KIR3DL3Q8N743 410 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 OR13F1Q8NGS4 319 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 SLC25A28Q96A46 364 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 FOXRED1Q96CU9 486 aaPredicted RBP10.57□□□□□ -0.72
COL18A1-206ENST00000459895 COQ2Q96H96 371 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 SNX22Q96L94 193 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 Q96M66 194 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 TBX15Q96SF7 602 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 GLS2Q9UI32 602 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 SSR3Q9UNL2 185 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 AUP1Q9Y679 476 aa10.57□□□□□ -0.72
COL18A1-206ENST00000459895 IGHV3OR16-10A0A075B7F0 116 aa10.56□□□□□ -0.72
COL18A1-206ENST00000459895 OR7C1O76099 320 aaPredicted RBP10.56□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms