RNA–Protein interactions for RNA: ENST00000458268.5

USP39-209, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 4

Gene USP39, Length 751 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-209ENST00000458268 RSU1Q15404 277 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 SPIN3Q5JUX0 258 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 DMKNQ6E0U4 476 aaPredicted RBP15.29■□□□□ 0.04
USP39-209ENST00000458268 ASPHD2Q6ICH7 369 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 CRIP3Q6Q6R5 217 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 Q6YL49 198 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 C17orf107Q6ZR85 190 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 C3orf56Q8N813 242 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 PPP1R35Q8TAP8 253 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 RPS4Y2Q8TD47 263 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 TNFRSF14Q92956 283 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 MYDGFQ969H8 173 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 CNBD2Q96M20 576 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 DMRTB1Q96MA1 342 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 S100A13Q99584 98 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 CCDC90BQ9GZT6 254 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 CKLFQ9UBR5 152 aa15.29■□□□□ 0.04
USP39-209ENST00000458268 CDRT1O95170 752 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 CRYBA1P05813 215 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 FBP1P09467 338 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 PAX6P26367 422 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 BDKRB2P30411 391 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 BMXP51813 675 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 RIPK1Q13546 671 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 DOC2BQ14184 412 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 Q499Y3 187 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 SAXO1Q8IYX7 474 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 NANOGP1Q8N7R0 232 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 TBC1D15Q8TC07 691 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 MND1Q9BWT6 205 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 CHIAQ9BZP6 476 aa15.28■□□□□ 0.04
USP39-209ENST00000458268 SF3B6Q9Y3B4 125 aaKnown RBP15.28■□□□□ 0.04
USP39-209ENST00000458268 hADV38S2A0JD32 116 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 TMEM89A2RUT3 159 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 BTBD17A6NE02 478 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 FAM181BA6NEQ2 426 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 H0YJX3 145 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 DEGS1O15121 323 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 ATP6V1G2O95670 118 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 MAS1P04201 325 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 ZNF93P35789 620 aaPredicted RBP15.27■□□□□ 0.04
USP39-209ENST00000458268 OR3A1P47881 315 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 UBE2E1P51965 193 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 ATXN7L3Q14CW9 347 aaPredicted RBP15.27■□□□□ 0.04
USP39-209ENST00000458268 ZNF146Q15072 292 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 MED22Q15528 200 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 TUSC1Q2TAM9 212 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 PLA1AQ53H76 456 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 YIF1BQ5BJH7 314 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 C16orf87Q6PH81 154 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 METAP1DQ6UB28 335 aaPredicted RBP15.27■□□□□ 0.04
USP39-209ENST00000458268 C1orf122Q6ZSJ8 110 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 JAGN1Q8N5M9 183 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 ZNF485Q8NCK3 441 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 SSMEM1Q8WWF3 244 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 PGLYRP3Q96LB9 341 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 ZNF714Q96N38 554 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 HEXA-AS1Q9H8Q6 139 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 TMEM138Q9NPI0 162 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 FKBP14Q9NWM8 211 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 TPRKBQ9Y3C4 175 aa15.27■□□□□ 0.04
USP39-209ENST00000458268 DNHD1Q96M86 4753 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 TRBV5-5A0A0J9YX44 114 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 MAGEA13PA6NCF6 341 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 MGST3O14880 152 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 ALX3O95076 343 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 ZNF728P0DKX0 622 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 HKR1P10072 659 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 SERPINA2P20848 420 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 MYF6P23409 242 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 LGALS4P56470 323 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 AESQ08117 197 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 DYNC1I2Q13409 638 aaKnown RBP15.26■□□□□ 0.03
USP39-209ENST00000458268 PIGYQ3MUY2 71 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 AWAT1Q58HT5 328 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 C17orf50Q8WW18 174 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 OR5M11Q96RB7 305 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 ZNF184Q99676 751 aaPredicted RBP15.26■□□□□ 0.03
USP39-209ENST00000458268 TMED9Q9BVK6 235 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 PAK1IP1Q9NWT1 392 aaPredicted RBP15.26■□□□□ 0.03
USP39-209ENST00000458268 KIAA2026Q5HYC2 2103 aa15.26■□□□□ 0.03
USP39-209ENST00000458268 TRAV8-7A0A075B6U6 113 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 CLDN34H7C241 214 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 CSTBP04080 98 aaKnown RBP15.25■□□□□ 0.03
USP39-209ENST00000458268 HSMCR30P0CW71 290 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 TGFBR2P37173 567 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 MTNR1BP49286 362 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 RPS11P62280 158 aaKnown RBP eCLIP15.25■□□□□ 0.03
USP39-209ENST00000458268 HCP5Q6MZN7 132 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 ANKRD60Q9BZ19 345 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 METTL9Q9H1A3 318 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 DPAGT1Q9H3H5 408 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 ZNRD1Q9P1U0 126 aa15.25■□□□□ 0.03
USP39-209ENST00000458268 RGS10O43665 173 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 ARG1P05089 322 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 PTGFRP43088 359 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 GLIPR1P48060 266 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 HSPA13P48723 471 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 P2RX3P56373 397 aa15.24■□□□□ 0.03
USP39-209ENST00000458268 MEF2CQ06413 473 aaPredicted RBP15.24■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms