RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 OR4X2Q8NGF9 303 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 RBFOX1Q9NWB1 397 aaKnown RBP17.22■□□□□ 0.35
CPNE1-220ENST00000458038 PCDHGB5Q9Y5G0 923 aa17.22■□□□□ 0.35
CPNE1-220ENST00000458038 LOC107986453A0A1B0GWG9 222 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 M0QZK8 103 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 MITFO75030 526 aaPredicted RBP17.21■□□□□ 0.35
CPNE1-220ENST00000458038 ENTPD6O75354 484 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 OR2F2O95006 317 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 OR3A1P47881 315 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 NPBWR2P48146 333 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 LHFPL2Q6ZUX7 228 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 RFKQ969G6 155 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 RBM14Q96PK6 669 aaKnown RBP17.21■□□□□ 0.35
CPNE1-220ENST00000458038 IL36RNQ9UBH0 155 aa17.21■□□□□ 0.35
CPNE1-220ENST00000458038 MPIG6BO95866 241 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 IGLV1-47P01700 117 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 PRKACAP17612 351 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 BCL3P20749 454 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 CD34P28906 385 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 PDZK1IP1Q13113 114 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 ATP6AP1Q15904 470 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 VAX1Q5SQQ9 334 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 FAM220AQ7Z4H9 259 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 KCTD20Q7Z5Y7 419 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 PRSS35Q8N3Z0 413 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 OR10H4Q8NGA5 316 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 SPSB1Q96BD6 273 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 SLC25A33Q9BSK2 321 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 GPR61Q9BZJ8 451 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 HMG20AQ9NP66 347 aa17.2■□□□□ 0.34
CPNE1-220ENST00000458038 EXOSC4Q9NPD3 245 aaKnown RBP17.2■□□□□ 0.34
CPNE1-220ENST00000458038 OOSP1A8MZH6 123 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 H3BSH0 61 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 MMP23AO75900 390 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 CDK2P24941 298 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 LMO1P25800 156 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 DUSP1P28562 367 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 POU3F4P49335 361 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 PRRX1P54821 245 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 ISL1P61371 349 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 KPNB1Q14974 876 aaKnown RBP17.19■□□□□ 0.34
CPNE1-220ENST00000458038 TCTEX1D4Q5JR98 221 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 CCDC144NLQ6NUI1 221 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 CCDC121Q6ZUS5 278 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 OR8J1Q8NGP2 316 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 GABARAPL1Q9H0R8 117 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 HHLA2Q9UM44 414 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 TENM3Q9P273 2699 aa17.19■□□□□ 0.34
CPNE1-220ENST00000458038 TOR1AO14656 332 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 ISG15P05161 165 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 LPLP06858 475 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 ATF1P18846 271 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 FASP25445 335 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 ABCA11PQ4W5N1 156 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 CHST4Q8NCG5 386 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 OR4D6Q8NGJ1 314 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 MYDGFQ969H8 173 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 SLC7A6OSQ96CW6 309 aaPredicted RBP17.18■□□□□ 0.34
CPNE1-220ENST00000458038 NEK6Q9HC98 313 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP17.18■□□□□ 0.341e-7■■■■□ 24.8
CPNE1-220ENST00000458038 GNG8Q9UK08 70 aa17.18■□□□□ 0.34
CPNE1-220ENST00000458038 IGKV1-9A0A0C4DH69 117 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 OR2H2O95918 312 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 CSN2P05814 226 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 OCM2P0CE71 109 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 OCMP0CE72 109 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-220ENST00000458038 ZNF20P17024 532 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 MNDAP41218 407 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 KIR3DL2P43630 455 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 PRAMEF5Q5TYX0 476 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 SAXO1Q8IYX7 474 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 OR2G2Q8NGZ5 317 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 FGGYQ96C11 551 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 ADAT3Q96EY9 351 aaPredicted RBP17.17■□□□□ 0.34
CPNE1-220ENST00000458038 COMMD4Q9H0A8 199 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 PCDHB16Q9NRJ7 776 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 GSTK1Q9Y2Q3 226 aa17.17■□□□□ 0.34
CPNE1-220ENST00000458038 A0A087X0M5 115 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 A0A1B0GX30 115 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 BUB1B-PAK6H3BSN5 160 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 K7EIL1 84 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 SIRPB1O00241 398 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 MT-ND2P03891 347 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 CD24P25063 80 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 HLA-DRB5Q30154 266 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 FDX2Q6P4F2 183 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 RDH10Q8IZV5 341 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 OPALINQ96PE5 141 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 CIB1Q99828 191 aa17.16■□□□□ 0.34
CPNE1-220ENST00000458038 ODAMA1E959 279 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 KDM4BO94953 1096 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 FAM106CPP0CH98 169 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 FCGR1AP12314 374 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 PTGFRP43088 359 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 GLIPR1P48060 266 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 AESQ08117 197 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 TP53I3Q53FA7 332 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 TPTE2P1Q5T6R2 138 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 THNSL2Q86YJ6 484 aa17.15■□□□□ 0.34
CPNE1-220ENST00000458038 EME1Q96AY2 570 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms