RNA–Protein interactions for RNA: ENST00000456983.1

COL21A1-204, Transcript of collagen type XXI alpha 1 chain, human

TSL 3

Gene COL21A1, Length 480 nt, Biotype protein coding.

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COL21A1-204	ENST00000456983	NDNF	Q8TB73	568 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	LRRC29	Q8WV35	223 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	TNFAIP8L1	Q8WVP5	186 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	IGFBPL1	Q8WX77	278 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	CCL17	Q92583	94 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	YIPF5	Q969M3	257 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	SPSB1	Q96BD6	273 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	CPNE2	Q96FN4	548 aa	Predicted RBP	3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	ZNF488	Q96MN9	340 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	KCTD7	Q96MP8	289 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	GAL3ST1	Q99999	423 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	PIMREG	Q9BSJ6	248 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	PPIL3	Q9H2H8	161 aa	Known RBP	3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	PLGRKT	Q9HBL7	147 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	TMEM138	Q9NPI0	162 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	BEX4	Q9NWD9	120 aa	Predicted RBP	3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	TXNL4B	Q9NX01	149 aa	Known RBP	3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	DNAJB11	Q9UBS4	358 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	IL19	Q9UHD0	177 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	FBXO9	Q9UK97	447 aa	Predicted RBP	3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	EDAR	Q9UNE0	448 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	PPP1R3C	Q9UQK1	317 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	AK6	Q9Y3D8	172 aa	Known RBP	3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	OTOG	Q6ZRI0	2925 aa		3.91	□□□□□ -1.78
COL21A1-204	ENST00000456983	IGHV4-30-2	A0A087WSY4	118 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983		A0A0B4J203	849 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983		A0A1B0GWJ7	208 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	TRDV1	A0A1B0GX56	115 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	LRRC30	A6NM36	301 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	PDCD5	O14737	125 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	WNT9B	O14905	357 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	RP2	O75695	350 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	NXPH2	O95156	264 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CDRT1	O95170	752 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CYB5A	P00167	134 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	TFF1	P04155	84 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CSF3	P09919	207 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	TMEM225B	P0DP42	221 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	ADRA2C	P18825	462 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SRM	P19623	302 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	RAB3B	P20337	219 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	BCL3	P20749	454 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SERPINA2	P20848	420 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	GATA3	P23771	443 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SDC2	P34741	201 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	GPR6	P46095	362 aa	Predicted RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	RPL5	P46777	297 aa	Known RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CEBPD	P49716	269 aa	Predicted RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	RBP2	P50120	134 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	PDLIM4	P50479	330 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	FUT6	P51993	359 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	ZNF134	P52741	427 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	ART1	P52961	327 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CAV3	P56539	151 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CLDN12	P56749	244 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	ZP1	P60852	638 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	P2RY14	Q15391	338 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	KISS1	Q15726	138 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	RAB11B	Q15907	218 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CLEC12B	Q2HXU8	276 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SMIM21	Q3B7S5	101 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CT83	Q5H943	113 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	FAM201A	Q5SY85	155 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	HES5	Q5TA89	166 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	GLT8D1	Q68CQ7	371 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SFRP4	Q6FHJ7	346 aa	Predicted RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CD200R1L	Q6Q8B3	271 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	WDR82	Q6UXN9	313 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SLC16A12	Q6ZSM3	486 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983		Q6ZSR3	168 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	LRRTM1	Q86UE6	522 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	ZNF573	Q86YE8	665 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	C1orf87	Q8N0U7	546 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SPERT	Q8NA61	448 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	ZBTB8B	Q8NAP8	495 aa	Predicted RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	OR5A2	Q8NGI9	324 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	AQP3	Q92482	292 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	RDH5	Q92781	318 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	EMG1	Q92979	244 aa	Known RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	NINJ1	Q92982	152 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	FAM46B	Q96A09	425 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	ISOC1	Q96CN7	298 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SEH1L	Q96EE3	360 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	S100A13	Q99584	98 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	GFI1	Q99684	422 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	BPESC1	Q9GZL8	116 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	OR51I2	Q9H344	312 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CHODL	Q9H9P2	273 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	SNTG1	Q9NSN8	517 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	TMEM106B	Q9NUM4	274 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	ZNF701	Q9NV72	531 aa	Predicted RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	RBFOX1	Q9NWB1	397 aa	Known RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	IL36RN	Q9UBH0	155 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	OR14J1	Q9UGF5	321 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	FOXJ3	Q9UPW0	622 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	GSTK1	Q9Y2Q3	226 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	MRPS28	Q9Y2Q9	187 aa	Known RBP	3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	POLDIP2	Q9Y2S7	368 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	CR1	P17927	2039 aa		3.9	□□□□□ -1.79
COL21A1-204	ENST00000456983	IGKV1-12	A0A0C4DH73	117 aa		3.89	□□□□□ -1.79

Retrieved 100 of 20,778 RNA–protein pairs in 71.2 ms