RNA–Protein interactions for RNA: ENST00000455478.5

CLCN1-203, Transcript of chloride voltage-gated channel 1, humanhuman

TSL 1 (best)

Gene CLCN1, Length 569 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN1-203ENST00000455478 DSCAML1Q8TD84 2053 aa12.12□□□□□ -0.47
CLCN1-203ENST00000455478 ARL6IP5O75915 188 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 OR2H2O95918 312 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 PDCD1Q15116 288 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 SYT6Q5T7P8 510 aaPredicted RBP12.11□□□□□ -0.47
CLCN1-203ENST00000455478 GLIPR1L1Q6UWM5 242 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 TEX29Q8N6K0 151 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 TSPAN14Q8NG11 270 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 OR4S1Q8NGB4 309 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 OR4M1Q8NGD0 313 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 WDFY2Q96P53 400 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 NR1H4Q96RI1 486 aaPredicted RBP12.11□□□□□ -0.47
CLCN1-203ENST00000455478 GFI1Q99684 422 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 UQCC2Q9BRT2 126 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 SIRPDQ9H106 197 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 ZNF696Q9H7X3 374 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 EXOSC4Q9NPD3 245 aaKnown RBP12.11□□□□□ -0.47
CLCN1-203ENST00000455478 C19orf12Q9NSK7 152 aa12.11□□□□□ -0.47
CLCN1-203ENST00000455478 TRBV23-1A0A0A0MS06 115 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 A0A0G2JK05 382 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 TRDV1A0A1B0GX56 115 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 A0A1W2PP11 408 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 SIRPB1O00241 398 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 GABRR1P24046 479 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 CALRP27797 417 aaKnown RBP12.1□□□□□ -0.47
CLCN1-203ENST00000455478 OR3A1P47881 315 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 SCN1BQ07699 218 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 NEDD8Q15843 81 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 NHLRC3Q5JS37 347 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 C1orf100Q5SVJ3 147 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 TMEM200BQ69YZ2 307 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 PRIMA1Q86XR5 153 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 OR8H2Q8N162 312 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 Q8N7P7 452 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 OR5D13Q8NGL4 314 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 TBC1D15Q8TC07 691 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 FOXRED1Q96CU9 486 aaPredicted RBP12.1□□□□□ -0.47
CLCN1-203ENST00000455478 TBX15Q96SF7 602 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 S100A13Q99584 98 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 KPTNQ9Y664 436 aa12.1□□□□□ -0.47
CLCN1-203ENST00000455478 ATRQ13535 2644 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 A0A087WXM4 84 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 TRIM64CA6NLI5 447 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 SLC33A1O00400 549 aaPredicted RBP12.09□□□□□ -0.47
CLCN1-203ENST00000455478 DEGS1O15121 323 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 ZNF780AO75290 641 aaPredicted RBP12.09□□□□□ -0.47
CLCN1-203ENST00000455478 TOX4O94842 621 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 CSTBP04080 98 aaKnown RBP12.09□□□□□ -0.47
CLCN1-203ENST00000455478 IGHV4-38-2P0DP08 117 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 SERPINA2P20848 420 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 GALP22466 123 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 RPL31P62899 125 aaKnown RBP12.09□□□□□ -0.47
CLCN1-203ENST00000455478 IL13RA2Q14627 380 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 GRK1Q15835 563 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 SLC22A6Q4U2R8 563 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 METTL11BQ5VVY1 283 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 GLT8D1Q68CQ7 371 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 AWAT2Q6E213 333 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 C1orf122Q6ZSJ8 110 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 OSR2Q8N2R0 312 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 KIR3DL3Q8N743 410 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 CHST4Q8NCG5 386 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 PCGF1Q9BSM1 259 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 CHST6Q9GZX3 395 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 SLITRK2Q9H156 845 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 PCDHB16Q9NRJ7 776 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 ZNF581Q9P0T4 197 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 ONECUT1Q9UBC0 465 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 ST3GAL6Q9Y274 331 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 AK6Q9Y3D8 172 aaKnown RBP12.09□□□□□ -0.47
CLCN1-203ENST00000455478 CUBNO60494 3623 aa12.09□□□□□ -0.47
CLCN1-203ENST00000455478 IGHV3OR16-10A0A075B7F0 116 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 TRAV1-2A0A0B4J238 106 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 TRAV24A0A0B4J272 114 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 A0A1W2PQ09 198 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 SHISA3A0PJX4 238 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 MGST3O14880 152 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 ZNF44P15621 663 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 EPHA1P21709 976 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 RBM11P57052 281 aaKnown RBP12.08□□□□□ -0.48
CLCN1-203ENST00000455478 GPR176Q14439 515 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 GDPD3Q7L5L3 318 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 FAM185AQ8N0U4 392 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 C11orf42Q8N5U0 333 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 TMEM104Q8NE00 496 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 SLC25A28Q96A46 364 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 NUP50Q9UKX7 468 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 KIAA2026Q5HYC2 2103 aa12.08□□□□□ -0.48
CLCN1-203ENST00000455478 M0R1W7 72 aa12.07□□□□□ -0.48
CLCN1-203ENST00000455478 GEMIN2O14893 280 aaKnown RBP12.07□□□□□ -0.48
CLCN1-203ENST00000455478 SLC22A1O15245 554 aa12.07□□□□□ -0.48
CLCN1-203ENST00000455478 GTF2F2P13984 249 aa12.07□□□□□ -0.48
CLCN1-203ENST00000455478 ERP29P30040 261 aaKnown RBP12.07□□□□□ -0.48
CLCN1-203ENST00000455478 FGF9P31371 208 aaPredicted RBP12.07□□□□□ -0.48
CLCN1-203ENST00000455478 EDDM3BP56851 147 aa12.07□□□□□ -0.48
CLCN1-203ENST00000455478 MEF2CQ06413 473 aaPredicted RBP12.07□□□□□ -0.48
CLCN1-203ENST00000455478 EDDM3AQ14507 147 aa12.07□□□□□ -0.48
CLCN1-203ENST00000455478 ZNF273Q14593 569 aa12.07□□□□□ -0.48
CLCN1-203ENST00000455478 C22orf42Q6IC83 251 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms