RNA–Protein interactions for RNA: ENST00000454852.6

TRAF4-206, Transcript of TNF receptor associated factor 4, humanhuman

TSL 3

Gene TRAF4, Length 672 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF4-206ENST00000454852 SOSTQ9BQB4 213 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 TMEM246Q9BRR3 403 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 C6orf62Q9GZU0 229 aaPredicted RBP9.4□□□□□ -0.9
TRAF4-206ENST00000454852 FAM234AQ9H0X4 552 aa9.4□□□□□ -0.9
TRAF4-206ENST00000454852 ANKRD17O75179 2603 aaKnown RBP9.39□□□□□ -0.91
TRAF4-206ENST00000454852 TRAV24A0A0B4J272 114 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 POM121CA8CG34 1229 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 F5H0A9 414 aaPredicted RBP9.39□□□□□ -0.91
TRAF4-206ENST00000454852 C3orf80F5H4A9 247 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 SIGLEC5O15389 551 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 PPIHO43447 177 aaKnown RBP9.39□□□□□ -0.91
TRAF4-206ENST00000454852 XRCC3O43542 346 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 PDCD6O75340 191 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 CA11O75493 328 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 OR2H2O95918 312 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 CSN2P05814 226 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 EIF4EP06730 217 aaKnown RBP9.39□□□□□ -0.91
TRAF4-206ENST00000454852 FUT3P21217 361 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 TNFSF8P32971 234 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 RBMXP38159 391 aaKnown RBP9.39□□□□□ -0.91
TRAF4-206ENST00000454852 NR4A2P43354 598 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 PITPNBP48739 271 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 SFRP4Q6FHJ7 346 aaPredicted RBP9.39□□□□□ -0.91
TRAF4-206ENST00000454852 BAIAP2L2Q6UXY1 529 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 SLC36A1Q7Z2H8 476 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 CCDC190Q86UF4 302 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 KRTAP1-3Q8IUG1 177 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 LAX1Q8IWV1 398 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 BATF2Q8N1L9 274 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 GAPTQ8N292 157 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 MED30Q96HR3 178 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 GAFA1Q96PS6 74 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 NICN1Q9BSH3 213 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 PIMREGQ9BSJ6 248 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 ATG5Q9H1Y0 275 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 NCOR1P1Q9H4R4 102 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 ZNF665Q9H7R5 613 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 DIABLOQ9NR28 239 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 MAB21L2Q9Y586 359 aa9.39□□□□□ -0.91
TRAF4-206ENST00000454852 PDZD2O15018 2839 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 POLQO75417 2590 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 ASH1LQ9NR48 2969 aaKnown RBP9.38□□□□□ -0.91
TRAF4-206ENST00000454852 IGHV3OR15-7A0A075B7D8 119 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 NKX6-3A6NJ46 265 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 SERPINE3A8MV23 424 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 K7N7A8 449 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 SLC33A1O00400 549 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-206ENST00000454852 MFNGO00587 321 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 DEGS1O15121 323 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 SOCS1O15524 211 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 RGS5O15539 181 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 OR7C1O76099 320 aaPredicted RBP9.38□□□□□ -0.91
TRAF4-206ENST00000454852 MELTFP08582 738 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 GSTP1P09211 210 aaKnown RBP9.38□□□□□ -0.91
TRAF4-206ENST00000454852 SLC25A16P16260 332 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 HIST1H1DP16402 221 aaKnown RBP9.38□□□□□ -0.91
TRAF4-206ENST00000454852 CDK2P24941 298 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 PTBP1P26599 531 aaKnown RBP eCLIP9.38□□□□□ -0.91
TRAF4-206ENST00000454852 S100A5P33763 92 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 VEGFCP49767 419 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 IL13RA1P78552 427 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 IKZF1Q13422 519 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 MOGAT2Q3SYC2 334 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 PLAC9Q5JTB6 97 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 C17orf107Q6ZR85 190 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 BOLLQ8N9W6 283 aaKnown RBP9.38□□□□□ -0.91
TRAF4-206ENST00000454852 PPP1R35Q8TAP8 253 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 C15orf40Q8WUR7 153 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 ST8SIA4Q92187 359 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 RAB3CQ96E17 227 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 SNX22Q96L94 193 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 BPESC1Q9GZL8 116 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 SHARPINQ9H0F6 387 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 MIOXQ9UGB7 285 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 ARID1AO14497 2285 aa9.38□□□□□ -0.91
TRAF4-206ENST00000454852 ITPR2Q14571 2701 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 CSMD2Q7Z408 3487 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 TMEM82A0PJX8 343 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 CEACAM18A8MTB9 384 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 GPR37O15354 613 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 PSPNO60542 156 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 ZNF205O95201 554 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 HLA-DQB1P01920 261 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 GYPAP02724 150 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 WNT2P09544 360 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 ZNF44P15621 663 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 GABRR1P24046 479 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 DUSP1P28562 367 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 ERP29P30040 261 aaKnown RBP9.37□□□□□ -0.91
TRAF4-206ENST00000454852 BLVRBP30043 206 aaPredicted RBP9.37□□□□□ -0.91
TRAF4-206ENST00000454852 TALDO1P37837 337 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 NPY4RP50391 375 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 GMFBP60983 142 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 COL10A1Q03692 680 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 RBM39Q14498 530 aaKnown RBP9.37□□□□□ -0.91
TRAF4-206ENST00000454852 PNLIPRP3Q17RR3 467 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 CLEC12BQ2HXU8 276 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 ZNF260Q3ZCT1 412 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 AVPI1Q5T686 147 aa9.37□□□□□ -0.91
TRAF4-206ENST00000454852 CNIH2Q6PI25 160 aa9.37□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms