RNA–Protein interactions for RNA: ENST00000454240.1

SMARCC1-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin subfamily c member 1, humanhuman

TSL 3

Gene SMARCC1, Length 636 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCC1-203ENST00000454240 GALP22466 123 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 Q6P435 159 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 TSPAN14Q8NG11 270 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 OR4D6Q8NGJ1 314 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 FOXRED1Q96CU9 486 aaPredicted RBP23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 POM121Q96HA1 1249 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 SLITRK2Q9H156 845 aa23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 MRPS28Q9Y2Q9 187 aaKnown RBP23.08■■□□□ 1.29
SMARCC1-203ENST00000454240 A0A087WXM4 84 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 TRDV1A0A1B0GX56 115 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 PSPNO60542 156 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 ZNF780AO75290 641 aaPredicted RBP23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 MMP9P14780 707 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 ARF6P62330 175 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 NEDD8Q15843 81 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 GLT8D1Q68CQ7 371 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 OR8H2Q8N162 312 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 OR5D13Q8NGL4 314 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 WDFY2Q96P53 400 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 SIRPDQ9H106 197 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 C2CD3Q4AC94 2353 aa23.07■■□□□ 1.28
SMARCC1-203ENST00000454240 CSTBP04080 98 aaKnown RBP23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 CALRP27797 417 aaKnown RBP23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 GPR176Q14439 515 aa23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 IL13RA2Q14627 380 aa23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 NHLRC3Q5JS37 347 aa23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 KLF17Q5JT82 389 aaPredicted RBP23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 GLIPR1L1Q6UWM5 242 aa23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 TBC1D15Q8TC07 691 aa23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 C1orf147Q96MC9 270 aaPredicted RBP23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 NR1H4Q96RI1 486 aaPredicted RBP23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 PCDHB16Q9NRJ7 776 aa23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 C19orf12Q9NSK7 152 aa23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 KPTNQ9Y664 436 aa23.06■■□□□ 1.28
SMARCC1-203ENST00000454240 A0A0G2JK05 382 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 SIRPB1O00241 398 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 SERPINA2P20848 420 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 GABRR1P24046 479 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 SLC22A6Q4U2R8 563 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 C1orf100Q5SVJ3 147 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 AWAT2Q6E213 333 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 OSR2Q8N2R0 312 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 KIR3DL3Q8N743 410 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 CHST4Q8NCG5 386 aa23.05■■□□□ 1.28
SMARCC1-203ENST00000454240 DEGS1O15121 323 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 TOX4O94842 621 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 ZNF44P15621 663 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 RPL31P62899 125 aaKnown RBP23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 SCN1BQ07699 218 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 PDCD1Q15116 288 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 PIGYQ3MUY2 71 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 METTL11BQ5VVY1 283 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 OR4S1Q8NGB4 309 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 OR4M1Q8NGD0 313 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 TBX15Q96SF7 602 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 GFI1Q99684 422 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 CHST6Q9GZX3 395 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 ST3GAL6Q9Y274 331 aa23.04■■□□□ 1.28
SMARCC1-203ENST00000454240 A0A1W2PP11 408 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 A0A1W2PQ09 198 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 TRIM64CA6NLI5 447 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 OR3A1P47881 315 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 GRK1Q15835 563 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 GDPD3Q7L5L3 318 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 PPP1R35Q8TAP8 253 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 PCGF1Q9BSM1 259 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 ONECUT1Q9UBC0 465 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 GHRLQ9UBU3 117 aa23.03■■□□□ 1.28
SMARCC1-203ENST00000454240 SLC33A1O00400 549 aaPredicted RBP23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 MGST3O14880 152 aa23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 GTF2F2P13984 249 aa23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 RBM11P57052 281 aaKnown RBP23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 TMEM200BQ69YZ2 307 aa23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 C1orf122Q6ZSJ8 110 aa23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 FAM185AQ8N0U4 392 aa23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 Q8N7P7 452 aa23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 MRPS24Q96EL2 167 aaKnown RBP23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 NUP50Q9UKX7 468 aa23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 STUB1Q9UNE7 303 aa23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 AK6Q9Y3D8 172 aaKnown RBP23.02■■□□□ 1.28
SMARCC1-203ENST00000454240 TRAV1-2A0A0B4J238 106 aa23.01■■□□□ 1.27
SMARCC1-203ENST00000454240 M0R1W7 72 aa23.01■■□□□ 1.27
SMARCC1-203ENST00000454240 FGF9P31371 208 aaPredicted RBP23.01■■□□□ 1.27
SMARCC1-203ENST00000454240 PRIMA1Q86XR5 153 aa23.01■■□□□ 1.27
SMARCC1-203ENST00000454240 CMTM4Q8IZR5 234 aa23.01■■□□□ 1.27
SMARCC1-203ENST00000454240 IFT22Q9H7X7 185 aa23.01■■□□□ 1.27
SMARCC1-203ENST00000454240 SHISA3A0PJX4 238 aa23■■□□□ 1.27
SMARCC1-203ENST00000454240 SLC22A1O15245 554 aa23■■□□□ 1.27
SMARCC1-203ENST00000454240 IGHV4-38-2P0DP08 117 aa23■■□□□ 1.27
SMARCC1-203ENST00000454240 EPHA1P21709 976 aa23■■□□□ 1.27
SMARCC1-203ENST00000454240 ERP29P30040 261 aaKnown RBP23■■□□□ 1.27
SMARCC1-203ENST00000454240 EDDM3BP56851 147 aa23■■□□□ 1.27
SMARCC1-203ENST00000454240 C22orf42Q6IC83 251 aa23■■□□□ 1.27
SMARCC1-203ENST00000454240 LINC00596Q86U02 117 aa23■■□□□ 1.27
SMARCC1-203ENST00000454240 TXNL4BQ9NX01 149 aaKnown RBP23■■□□□ 1.27
SMARCC1-203ENST00000454240 TRAV24A0A0B4J272 114 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 GEMIN2O14893 280 aaKnown RBP22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 CSN2P05814 226 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 UBBP0CG47 229 aa22.99■■□□□ 1.27
SMARCC1-203ENST00000454240 JUNBP17275 347 aaPredicted RBP22.99■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms