RNA–Protein interactions for RNA: ENST00000453349.5

NCKIPSD-207, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 3

Gene NCKIPSD, Length 889 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-207ENST00000453349 ARSBP15848 533 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 HNF1AP20823 631 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 RBM11P57052 281 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 PAX2Q02962 417 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 PDCD1Q15116 288 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 RAB11BQ15907 218 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 CR1LQ2VPA4 569 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 PIGYQ3MUY2 71 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 NHLRC3Q5JS37 347 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 Q6P435 159 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 GDPD3Q7L5L3 318 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 FGFRL1Q8N441 504 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 TEX29Q8N6K0 151 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR13F1Q8NGS4 319 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 KCNG3Q8TAE7 436 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 DMRTB1Q96MA1 342 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 FUNDC2Q9BWH2 189 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 SHARPINQ9H0F6 387 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 BANF2Q9H503 90 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 STEAP1Q9UHE8 339 aa12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 RPUSD1Q9UJJ7 312 aaKnown RBP12.1□□□□□ -0.47
NCKIPSD-207ENST00000453349 ITPR3Q14573 2671 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 SHISA3A0PJX4 238 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 C22orf46C9J442 243 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 BPNT1O95861 308 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 MGMTP16455 207 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 EDDM3BP56851 147 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 PAX8Q06710 450 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 GRK1Q15835 563 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 MPV17LQ2QL34 196 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 HES5Q5TA89 166 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 C17orf107Q6ZR85 190 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 GPR141Q7Z602 305 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 OR8H2Q8N162 312 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 SLC25A28Q96A46 364 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 CENPOQ9BU64 300 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 SELENOIQ9C0D9 397 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 CHST6Q9GZX3 395 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 LPAR3Q9UBY5 353 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 AUP1Q9Y679 476 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 CREBBPQ92793 2442 aa12.09□□□□□ -0.47
NCKIPSD-207ENST00000453349 TRBV23-1A0A0A0MS06 115 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 A0A1W2PP11 408 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 A0A1W2PPH5 198 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 A0A1W2PQ09 198 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 TMEM82A0PJX8 343 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 FUOMA2VDF0 154 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 IFITM5A6NNB3 132 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 NOTOA8MTQ0 251 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 INAFM1C9JVW0 142 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 H3BUI4 141 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 SLC33A1O00400 549 aaPredicted RBP12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 MGST3O14880 152 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 GEMIN2O14893 280 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 PSPNO60542 156 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 ZNF737O75373 536 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 OR7C1O76099 320 aaPredicted RBP12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 MPIG6BO95866 241 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 TFAP2AP05549 437 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 VSIG8P0DPA2 414 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 SDC2P34741 201 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 ALDH3B2P48448 385 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 OR10A3P58181 314 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 LSM3P62310 102 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 RPL31P62899 125 aaKnown RBP12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 P2RY14Q15391 338 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 C2orf76Q3KRA6 126 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM120AOSQ5T036 256 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 ATAD3CQ5T2N8 411 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM185AQ8N0U4 392 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 LY6G5BQ8NDX9 201 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 OR4S1Q8NGB4 309 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 OR4M1Q8NGD0 313 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 OR51D1Q8NGF3 324 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 C8orf46Q8TAG6 207 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM46BQ96A09 425 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 POM121Q96HA1 1249 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 C1orf147Q96MC9 270 aaPredicted RBP12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 BEX2Q9BXY8 128 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 TMPRSS13Q9BYE2 586 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 RNF167Q9H6Y7 350 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 IFT22Q9H7X7 185 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 SCOCQ9UIL1 159 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 CDC42EP3Q9UKI2 254 aa12.08□□□□□ -0.48
NCKIPSD-207ENST00000453349 VPS13CQ709C8 3753 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A10PA6NDY2 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A18PA6NE21 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A16PA6NEW6 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A20PA6NIJ5 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A8PA6NJQ4 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A7PA6NKC0 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A22PA8MWA6 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A12PA8MX19 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A5PA8MXJ8 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A23PA8MXZ1 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A15PP0C7V4 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A13PP0C7W8 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A14PP0C7W9 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 FAM90A24PP0C7X0 464 aa12.07□□□□□ -0.48
NCKIPSD-207ENST00000453349 ARF6P62330 175 aa12.07□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms