RNA–Protein interactions for RNA: ENST00000452973.6

VTA1-203, Transcript of vesicle trafficking 1, humanhuman

TSL 2 BASIC

Gene VTA1, Length 3,177 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-203ENST00000452973 RNF222A6NCQ9 220 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 RPS2P15880 293 aaKnown RBP10.08□□□□□ -0.8
VTA1-203ENST00000452973 MRPL49Q13405 166 aaKnown RBP10.08□□□□□ -0.8
VTA1-203ENST00000452973 IGFL2Q6UWQ7 119 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 OR1J1Q8NGS3 322 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 ICE1Q9Y2F5 2266 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 F5H0A9 414 aaPredicted RBP10.08□□□□□ -0.8
VTA1-203ENST00000452973 ZNF14P17017 642 aaPredicted RBP10.08□□□□□ -0.8
VTA1-203ENST00000452973 FGF12P61328 243 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 GABRA6Q16445 453 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 Q6ZT83 130 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 GPHA2Q96T91 129 aa10.08□□□□□ -0.8
VTA1-203ENST00000452973 CADP27708 2225 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 A0A0D9SG52 128 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 K7EM74 188 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 ZNF44P15621 663 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 GNG3P63215 75 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 RAB32Q13637 225 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 ACOT7LQ6ZUV0 252 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 SLC51BQ86UW2 128 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 CXorf67Q86X51 503 aaPredicted RBP10.07□□□□□ -0.8
VTA1-203ENST00000452973 SLC25A40Q8TBP6 338 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 OPN3Q9H1Y3 402 aaPredicted RBP10.07□□□□□ -0.8
VTA1-203ENST00000452973 HEATR1Q9H583 2144 aaKnown RBP10.07□□□□□ -0.8
VTA1-203ENST00000452973 RAB18Q9NP72 206 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 H0YIZ8 118 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 AQP7O14520 342 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 RRP8O43159 456 aaKnown RBP10.07□□□□□ -0.8
VTA1-203ENST00000452973 SMPD2O60906 423 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 SCGB1D2O95969 90 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 GRPP07492 148 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 SCTP09683 121 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 AADACP22760 399 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 GLP1RP43220 463 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 ZNF169Q14929 603 aaPredicted RBP10.07□□□□□ -0.8
VTA1-203ENST00000452973 TMEM65Q6PI78 240 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 ZNF573Q86YE8 665 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 ZNF610Q8N9Z0 462 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 OR6K3Q8NGY3 331 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 SCARB1Q8WTV0 552 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 RTN4IP1Q8WWV3 396 aaPredicted RBP10.07□□□□□ -0.8
VTA1-203ENST00000452973 ST8SIA2Q92186 375 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 GP6Q9HCN6 339 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 OR5AC2Q9NZP5 309 aa10.07□□□□□ -0.8
VTA1-203ENST00000452973 TRAV39A0A0B4J263 110 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 CDK2AP1O14519 115 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 OR5AC1P0C628 307 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 SLC25A4P12235 298 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 ZNF250P15622 560 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 NUBP1P53384 320 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 HERV-K104P61576 105 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 CYCSP99999 105 aaKnown RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 HOXA4Q00056 320 aaPredicted RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 SRSF4Q08170 494 aaKnown RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 SURF2Q15527 256 aaPredicted RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 IAH1Q2TAA2 248 aaPredicted RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 TOR2AQ5JU69 321 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 SPIN3Q5JUX0 258 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 KCNRGQ8N5I3 272 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 GALNT11Q8NCW6 608 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 DMRTA2Q96SC8 542 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 GLRX2Q9NS18 164 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 MPC1Q9Y5U8 109 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 CDIPTO14735 213 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 SNAPC5O75971 98 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 OR2F2O95006 317 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 PDGFAP04085 211 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 CTSDP07339 412 aaPredicted RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 NMBP08949 121 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 OR2F1Q13607 317 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 TMEM211Q6ICI0 200 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 DHRS11Q6UWP2 260 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 PRR18Q8N4B5 295 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 SECTM1Q8WVN6 248 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 RRNAD1Q96FB5 475 aaKnown RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 RNF126Q9BV68 326 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 OPA3Q9H6K4 179 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 C1orf123Q9NWV4 160 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 KIAA2026Q5HYC2 2103 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 A0A0B4J2A0 478 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 H0YL77 283 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 UCP2P55851 309 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 ACSF3Q4G176 576 aaPredicted RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 MEX3BQ6ZN04 569 aaKnown RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 DPPA2Q7Z7J5 298 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 FAM58AQ8N1B3 248 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 UBALD1Q8TB05 177 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 MRPL24Q96A35 216 aaKnown RBP10.06□□□□□ -0.8
VTA1-203ENST00000452973 NMES1Q9C002 83 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 ZC4H2Q9NQZ6 224 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 SLC2A9Q9NRM0 540 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 SHPKQ9UHJ6 478 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 KCNIP3Q9Y2W7 256 aa10.06□□□□□ -0.8
VTA1-203ENST00000452973 MPV17P39210 176 aa10.05□□□□□ -0.8
VTA1-203ENST00000452973 FABP6P51161 128 aa10.05□□□□□ -0.8
VTA1-203ENST00000452973 RBM39Q14498 530 aaKnown RBP10.05□□□□□ -0.8
VTA1-203ENST00000452973 THOC7Q6I9Y2 204 aaKnown RBP10.05□□□□□ -0.8
VTA1-203ENST00000452973 RPRMLQ8N4K4 120 aa10.05□□□□□ -0.8
VTA1-203ENST00000452973 BOLLQ8N9W6 283 aaKnown RBP10.05□□□□□ -0.8
VTA1-203ENST00000452973 SUMF2Q8NBJ7 301 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms