RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 C17orf50Q8WW18 174 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 ZNF649Q9BS31 505 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 JAM3Q9BX67 310 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 MEGF9Q9H1U4 602 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 VCXQ9H320 206 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 ZNF696Q9H7X3 374 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 RHOFQ9HBH0 211 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 RAB18Q9NP72 206 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 EXOSC1Q9Y3B2 195 aaKnown RBP12.63□□□□□ -0.39
LIMS1-210ENST00000449684 LINC00312Q9Y6C7 94 aa12.63□□□□□ -0.39
LIMS1-210ENST00000449684 PSPNO60542 156 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 ALX3O95076 343 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 RBP4P02753 201 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 IGHV1-8P0DP01 117 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 OR2G6Q5TZ20 316 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 OR4S1Q8NGB4 309 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 LINC01006Q8NI28 216 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 WFDC12Q8WWY7 111 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 TMEM80Q96HE8 168 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 FAM192AQ9GZU8 254 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 ABCB10Q9NRK6 738 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 BABAM2Q9NXR7 383 aa12.62□□□□□ -0.39
LIMS1-210ENST00000449684 TRGV10A0A0A0MS01 117 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 IGKV1-12A0A0C4DH73 117 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 DEGS1O15121 323 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 OR2H2O95918 312 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 IGKV1D-12P01611 117 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 PAX6P26367 422 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 DLX6P56179 175 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 P2RX3P56373 397 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 PPP3R1P63098 170 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 IL18R1Q13478 541 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 CDK5R1Q15078 307 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 AANATQ16613 207 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 PLA1AQ53H76 456 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 PRR31Q5SQ13 230 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 Q6ZSV7 163 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 C8orf59Q8N0T1 100 aaPredicted RBP12.61□□□□□ -0.39
LIMS1-210ENST00000449684 TNFAIP8L1Q8WVP5 186 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 FOXRED1Q96CU9 486 aaPredicted RBP12.61□□□□□ -0.39
LIMS1-210ENST00000449684 NR1H4Q96RI1 486 aaPredicted RBP12.61□□□□□ -0.39
LIMS1-210ENST00000449684 GAL3ST2Q9H3Q3 398 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 ING3Q9NXR8 418 aa12.61□□□□□ -0.39
LIMS1-210ENST00000449684 DIMT1Q9UNQ2 313 aaKnown RBP12.61□□□□□ -0.39
LIMS1-210ENST00000449684 TBL2Q9Y4P3 447 aaKnown RBP12.61□□□□□ -0.39
LIMS1-210ENST00000449684 ERP29P30040 261 aaKnown RBP12.6□□□□□ -0.39
LIMS1-210ENST00000449684 OR3A1P47881 315 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 SRSF4Q08170 494 aaKnown RBP12.6□□□□□ -0.39
LIMS1-210ENST00000449684 RSU1Q15404 277 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 FAM189A2Q15884 450 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 RNF144BQ7Z419 303 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 LHFPL4Q7Z7J7 247 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 CHST4Q8NCG5 386 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 NDNFQ8TB73 568 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 TMEM106AQ96A25 262 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 MALSU1Q96EH3 234 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 S100A13Q99584 98 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 TAS2R4Q9NYW5 299 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 ZNF281Q9Y2X9 895 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 UBE2J1Q9Y385 318 aaPredicted RBP12.6□□□□□ -0.39
LIMS1-210ENST00000449684 SESN1Q9Y6P5 492 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 HSPE1-MOB4S4R3N1 261 aa12.6□□□□□ -0.39
LIMS1-210ENST00000449684 EFCAB10A6NFE3 127 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 H3BUI4 141 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 TIMM23O14925 209 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 TSPAN9O75954 239 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 CLPXO76031 633 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 GABRA5P31644 462 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 CAPGP40121 348 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 MTNR1BP49286 362 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 ADARB1P78563 741 aaKnown RBP12.59□□□□□ -0.39
LIMS1-210ENST00000449684 AESQ08117 197 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 SSX2Q16385 188 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 KRBOX4Q5JUW0 171 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 SLC35E4Q6ICL7 350 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 DTX3Q8N9I9 347 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 OR11H6Q8NGC7 330 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 OR4C13Q8NGP0 309 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 SMIM19Q96E16 107 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 CLEC7AQ9BXN2 247 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 TMEM133Q9H2Q1 129 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 C16orf95Q9H693 158 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 TCF7L1Q9HCS4 588 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 CKLFQ9UBR5 152 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 CLEC2DQ9UHP7 191 aa12.59□□□□□ -0.39
LIMS1-210ENST00000449684 A0A0G2JK05 382 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 ANKRD65E5RJM6 399 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 M0QZ24 198 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 LMO1P25800 156 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 ZP1P60852 638 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 ST3GAL4Q11206 333 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 ATXN7L3Q14CW9 347 aaPredicted RBP12.58□□□□□ -0.4
LIMS1-210ENST00000449684 ZNF626Q68DY1 528 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 XAF1Q6GPH4 301 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 OR52W1Q6IF63 320 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 TREML4Q6UXN2 200 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 LIAT1Q6ZQX7 453 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 STX19Q8N4C7 294 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 PXT1Q8NFP0 134 aa12.58□□□□□ -0.4
LIMS1-210ENST00000449684 OR51A2Q8NGJ7 313 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms