RNA–Protein interactions for RNA: ENST00000449049.7

SHMT2-203, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2 BASIC

Gene SHMT2, Length 2,121 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-203ENST00000449049 DUSP1P28562 367 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 ETV6P41212 452 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 BTG1P62324 171 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 IKZF1Q13422 519 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 NDUFA5Q16718 116 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 Q6P435 159 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 SLC7A5P1Q8MH63 180 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 ANGPTL6Q8NI99 470 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 DIABLOQ9NR28 239 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 BEX4Q9NWD9 120 aaPredicted RBP11.77□□□□□ -0.53
SHMT2-203ENST00000449049 RCC2Q9P258 522 aaKnown RBP11.77□□□□□ -0.53
SHMT2-203ENST00000449049 GLS2Q9UI32 602 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 PRELID1Q9Y255 219 aa11.77□□□□□ -0.53
SHMT2-203ENST00000449049 LRBAP50851 2863 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 SPTAN1Q13813 2472 aaKnown RBP11.76□□□□□ -0.53
SHMT2-203ENST00000449049 RFPL4AA6NLU0 287 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 RFPL4AL1F8VTS6 287 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 OR7C1O76099 320 aaPredicted RBP11.76□□□□□ -0.53
SHMT2-203ENST00000449049 HAND1O96004 215 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 IGHV2-70P01814 119 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 TALDO1P37837 337 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 ATP5J2P56134 94 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 TMEM50BP56557 158 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 TMEM33P57088 247 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 PDCD1Q15116 288 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 ZMYND11Q15326 602 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 PEG10Q86TG7 708 aaKnown RBP11.76□□□□□ -0.53
SHMT2-203ENST00000449049 MFSD4AQ8N468 514 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 CD177Q8N6Q3 437 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 PHF21AQ96BD5 680 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 SOSTQ9BQB4 213 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 OR14J1Q9UGF5 321 aa11.76□□□□□ -0.53
SHMT2-203ENST00000449049 H3BUI4 141 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 SH2D1BO14796 132 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 TNFRSF13BO14836 293 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-203ENST00000449049 SSX4O60224 188 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 OR2H2O95918 312 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 DNASE1P24855 282 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 LMO1P25800 156 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 CHATP28329 748 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 BLVRBP30043 206 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-203ENST00000449049 MNDAP41218 407 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 CEBPDP49716 269 aaPredicted RBP11.75□□□□□ -0.53
SHMT2-203ENST00000449049 PLAC9Q5JTB6 97 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF525Q8N782 197 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 OR5T2Q8NGG2 359 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 NINJ1Q92982 152 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 MBD6Q96DN6 1003 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 HSF4Q9ULV5 492 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 V9GYH0 126 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 DEGS1O15121 323 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 PDCD6O75340 191 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 GIFP27352 417 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 PRDX2P32119 198 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 MDH2P40926 338 aaKnown RBP11.75□□□□□ -0.53
SHMT2-203ENST00000449049 TMEM69Q5SWH9 247 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 BAIAP2L2Q6UXY1 529 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 DTX3Q8N9I9 347 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 CHST4Q8NCG5 386 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 DEFB108BQ8NET1 73 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 PERPQ96FX8 193 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 TIMD4Q96H15 378 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 LURAP1Q96LR2 239 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 DNTTIP1Q9H147 329 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 SPACA1Q9HBV2 294 aa11.75□□□□□ -0.53
SHMT2-203ENST00000449049 TRAV24A0A0B4J272 114 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 TFF1P04155 84 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 AMY2BP19961 511 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 FUT3P21217 361 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 NR4A2P43354 598 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 TAS2R20P59543 309 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 DEFB113Q30KQ7 82 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 SPANXN2Q5MJ10 180 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 C6orf183Q5T699 404 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 ATPAF1Q5TC12 328 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-203ENST00000449049 RTN4RL2Q86UN3 420 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 IZUMO1Q8IYV9 350 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 LRRC75A-AS1Q8N1F1 130 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 RAB1CQ92928 201 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 RAB3CQ96E17 227 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 SDSLQ96GA7 329 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 ARHGAP5-AS1Q96IT6 56 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 NEDD4LQ96PU5 975 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 PECRQ9BY49 303 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.74□□□□□ -0.53
SHMT2-203ENST00000449049 METRNQ9UJH8 293 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 TRAV18A0A075B6X5 111 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 FABP12A6NFH5 140 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 SIRPB1O00241 398 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 SLC33A1O00400 549 aaPredicted RBP11.74□□□□□ -0.53
SHMT2-203ENST00000449049 MFNGO00587 321 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 PPIHO43447 177 aaKnown RBP11.74□□□□□ -0.53
SHMT2-203ENST00000449049 GYPAP02724 150 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 CSF3P09919 207 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF44P15621 663 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 HIST1H1DP16402 221 aaKnown RBP11.74□□□□□ -0.53
SHMT2-203ENST00000449049 PDLIM4P50479 330 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 COL10A1Q03692 680 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 SCN1BQ07699 218 aa11.74□□□□□ -0.53
SHMT2-203ENST00000449049 ZNF260Q3ZCT1 412 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms