RNA–Protein interactions for RNA: ENST00000447873.5

SGCE-207, Transcript of sarcoglycan epsilon, humanhuman

TSL 1 (best) BASIC

Gene SGCE, Length 1,597 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCE-207ENST00000447873 SNX29P2Q8IUI4 249 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 C15orf40Q8WUR7 153 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 SPACA1Q9HBV2 294 aa16.38■□□□□ 0.21
SGCE-207ENST00000447873 ABCA12Q86UK0 2595 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 TRAV38-1A0A0B4J264 116 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 PDCD6O75340 191 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 TPPPO94811 219 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 OR2H2O95918 312 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 HLA-DQB1P01920 261 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 HIST1H1DP16402 221 aaKnown RBP16.37■□□□□ 0.21
SGCE-207ENST00000447873 GABRA2P47869 451 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 PTH2RP49190 550 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 CEBPDP49716 269 aaPredicted RBP16.37■□□□□ 0.21
SGCE-207ENST00000447873 ARL6IP1Q15041 203 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 CDNFQ49AH0 187 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 PYDC2Q56P42 97 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 Q6P435 159 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 C6orf201Q7Z4U5 140 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 ABHD1Q96SE0 405 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 IFT22Q9H7X7 185 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 CHODLQ9H9P2 273 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 HSF4Q9ULV5 492 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 EDARQ9UNE0 448 aa16.37■□□□□ 0.21
SGCE-207ENST00000447873 SIRPB1O00241 398 aa16.36■□□□□ 0.21
SGCE-207ENST00000447873 CHATP28329 748 aa16.36■□□□□ 0.21
SGCE-207ENST00000447873 PRDX2P32119 198 aa16.36■□□□□ 0.21
SGCE-207ENST00000447873 ZNF79Q15937 498 aa16.36■□□□□ 0.21
SGCE-207ENST00000447873 ZNF260Q3ZCT1 412 aa16.36■□□□□ 0.21
SGCE-207ENST00000447873 PECRQ9BY49 303 aa16.36■□□□□ 0.21
SGCE-207ENST00000447873 AUNIPQ9H7T9 357 aa16.36■□□□□ 0.21
SGCE-207ENST00000447873 ZNF701Q9NV72 531 aaPredicted RBP16.36■□□□□ 0.21
SGCE-207ENST00000447873 PLEKHA6Q9Y2H5 1048 aa16.36■□□□□ 0.21
SGCE-207ENST00000447873 IGKV1D-17A0A075B6S4 117 aa16.35■□□□□ 0.21
SGCE-207ENST00000447873 IGHV4-39P01824 125 aa16.35■□□□□ 0.21
SGCE-207ENST00000447873 GSTP1P09211 210 aaKnown RBP16.35■□□□□ 0.21
SGCE-207ENST00000447873 BTG1P62324 171 aa16.35■□□□□ 0.21
SGCE-207ENST00000447873 CARTPTQ16568 116 aa16.35■□□□□ 0.21
SGCE-207ENST00000447873 BRICD5Q6PL45 260 aa16.35■□□□□ 0.21
SGCE-207ENST00000447873 RTN4RL2Q86UN3 420 aa16.35■□□□□ 0.21
SGCE-207ENST00000447873 ANGPTL6Q8NI99 470 aa16.35■□□□□ 0.21
SGCE-207ENST00000447873 TIMD4Q96H15 378 aa16.35■□□□□ 0.21
SGCE-207ENST00000447873 RCC2Q9P258 522 aaKnown RBP16.35■□□□□ 0.21
SGCE-207ENST00000447873 TRAV24A0A0B4J272 114 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 TMEM235A6NFC5 223 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 MCRIP1C9JLW8 97 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 MFNGO00587 321 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 HSPB6O14558 160 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 GYPAP02724 150 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 TFF1P04155 84 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 PTHLHP12272 177 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 ATP5J2P56134 94 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 TMEM33P57088 247 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 COL10A1Q03692 680 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 STUMQ69YW2 141 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 CD177Q8N6Q3 437 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 SUMF2Q8NBJ7 301 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 FAAP24Q9BTP7 215 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 DPCDQ9BVM2 203 aaPredicted RBP16.34■□□□□ 0.21
SGCE-207ENST00000447873 SRRQ9GZT4 340 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 KCNK7Q9Y2U2 307 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 NBPF19A0A087WUL8 3843 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 SLC33A1O00400 549 aaPredicted RBP16.34■□□□□ 0.21
SGCE-207ENST00000447873 PPIHO43447 177 aaKnown RBP16.34■□□□□ 0.21
SGCE-207ENST00000447873 SSX4O60224 188 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 LMO1P25800 156 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 CD40LGP29965 261 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 PRSS3P35030 304 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 PPP5CP53041 499 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 ZMYND11Q15326 602 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 KCNJ8Q15842 424 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 PAN3Q58A45 887 aaKnown RBP16.34■□□□□ 0.21
SGCE-207ENST00000447873 OLFML2AQ68BL7 652 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 BPIFB2Q8N4F0 458 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 NEK7Q8TDX7 302 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 ST8SIA4Q92187 359 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 RAB1CQ92928 201 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 GCDHQ92947 438 aaPredicted RBP16.34■□□□□ 0.21
SGCE-207ENST00000447873 SULT4A1Q9BR01 284 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 SEBOXQ9HB31 216 aaPredicted RBP16.34■□□□□ 0.21
SGCE-207ENST00000447873 BARX1Q9HBU1 254 aaPredicted RBP16.34■□□□□ 0.21
SGCE-207ENST00000447873 MYOZ1Q9NP98 299 aaPredicted RBP16.34■□□□□ 0.21
SGCE-207ENST00000447873 ZNF222Q9UK12 451 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 APCP25054 2843 aa16.34■□□□□ 0.21
SGCE-207ENST00000447873 ANKRD17O75179 2603 aaKnown RBP16.33■□□□□ 0.21
SGCE-207ENST00000447873 ARID1AO14497 2285 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 UBE2QL1A1L167 161 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 ISPDA4D126 451 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 SERPINE3A8MV23 424 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 J3QRK9 145 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 MDH2P40926 338 aaKnown RBP16.33■□□□□ 0.2
SGCE-207ENST00000447873 ARFRP1Q13795 201 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 RBM39Q14498 530 aaKnown RBP16.33■□□□□ 0.2
SGCE-207ENST00000447873 PNLIPRP3Q17RR3 467 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 HACD4Q5VWC8 232 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 Q8N402 240 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 GDPD1Q8N9F7 314 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 ASCC1Q8N9N2 400 aaKnown RBP16.33■□□□□ 0.2
SGCE-207ENST00000447873 CYYR1Q96J86 154 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 TMEM165Q9HC07 324 aa16.33■□□□□ 0.2
SGCE-207ENST00000447873 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP16.33■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.6 ms