RNA–Protein interactions for RNA: ENST00000447232.6

PMS1-215, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 2 BASIC

Gene PMS1, Length 2,576 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-215ENST00000447232 ZCCHC18P0CG32 403 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 S100A3P33764 101 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 SOX6P35712 828 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 EDDM3BP56851 147 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 ADARB1P78563 741 aaKnown RBP2.37□□□□□ -2.03
PMS1-215ENST00000447232 DIAPH2-AS1Q14236 149 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 GFOD2Q3B7J2 385 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 SMIM21Q3B7S5 101 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 DRAM2Q6UX65 266 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 HEPN1Q6WQI6 88 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 FAM122BQ7Z309 247 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 MAVSQ7Z434 540 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 IZUMO1Q8IYV9 350 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 OR8H3Q8N146 312 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 POC1AQ8NBT0 407 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 NRG4Q8WWG1 115 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 AQP3Q92482 292 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 TOMM40LQ969M1 308 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 RPEQ96AT9 228 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 RCN3Q96D15 328 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 S1PR3Q99500 378 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 PAPOLGQ9BWT3 736 aaKnown RBP2.37□□□□□ -2.03
PMS1-215ENST00000447232 SYT4Q9H2B2 425 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 SLC25A19Q9HC21 320 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 OR6C3Q9NZP0 311 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 CYB5R1Q9UHQ9 305 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 PIGLQ9Y2B2 252 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 MPC1Q9Y5U8 109 aa2.37□□□□□ -2.03
PMS1-215ENST00000447232 FAM172BPA6NC97 362 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 PRORSD1PA6NEY8 169 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 TROVE2P10155 538 aaKnown RBP eCLIP2.36□□□□□ -2.03
PMS1-215ENST00000447232 ZP3P21754 424 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 IL12AP29459 219 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 PHBP35232 272 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 RBM34P42696 430 aaKnown RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 MRPS25P82663 173 aaKnown RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 RGNQ15493 299 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 GTDC1Q4AE62 458 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 PRAMEF5Q5TYX0 476 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 GDPD3Q7L5L3 318 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 RBM45Q8IUH3 476 aaKnown RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 LINC00346Q8IVM7 164 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 OR8H2Q8N162 312 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 C4orf33Q8N1A6 199 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 Q8N9P0 234 aaPredicted RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 FAM156AQ8NDB6 213 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 CSNK2A3Q8NEV1 391 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 OR4D11Q8NGI4 311 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 ZNF671Q8TAW3 534 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 RAB24Q969Q5 203 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 RNF170Q96K19 258 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 RASL11BQ9BPW5 248 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 HRH4Q9H3N8 390 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 CCDC134Q9H6E4 229 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 SLA2Q9H6Q3 261 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 HES4Q9HCC6 221 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 ABCB9Q9NP78 766 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 SNX12Q9UMY4 172 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 UBE2J1Q9Y385 318 aaPredicted RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 ADAM18Q9Y3Q7 739 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 TRAV41A0A0B4J266 112 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 KIR2DL5BA0A0G2JN68 375 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 KIR2DL5BA0A0G2JPC4 375 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 TLDC2A0PJX2 215 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 LINC00473A8K010 186 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 DCTN6O00399 190 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 RFXANKO14593 260 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 ATP6V0E1O15342 81 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 PLIN3O60664 434 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 NOS1APO75052 506 aaPredicted RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 CST4P01036 141 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 IGHV3-11P01762 117 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 SMR3BP02814 79 aaPredicted RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 NCK1P16333 377 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 CDK2P24941 298 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 ASIPP42127 132 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 RAB7AP51149 207 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 PRRX1P54821 245 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 APOC4P55056 127 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 PLTPP55058 493 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 SYNJ2BPP57105 145 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 CAV1Q03135 178 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 FADDQ13158 208 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 PRDX4Q13162 271 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 REEP3Q6NUK4 255 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 KRT74Q7RTS7 529 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 KRT73Q86Y46 540 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 KIR2DL5AQ8N109 375 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 TPRX1Q8N7U7 411 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 GPR32P1Q8NGA4 272 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 KIR2DL5BQ8NHK3 375 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 TRMT10AQ8TBZ6 339 aaKnown RBP2.36□□□□□ -2.03
PMS1-215ENST00000447232 TMEM163Q8TC26 289 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 ACMSDQ8TDX5 336 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 SPTSSAQ969W0 71 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 SGK3Q96BR1 496 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 Q96M85 177 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 ZNF488Q96MN9 340 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 OR52E6Q96RD3 313 aa2.36□□□□□ -2.03
PMS1-215ENST00000447232 KRTAP4-4Q9BYR3 166 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms