RNA–Protein interactions for RNA: ENST00000444712.5

SNX13-204, Transcript of sorting nexin 13, humanhuman

TSL 5

Gene SNX13, Length 2,018 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-204ENST00000444712 OR8H1Q8NGG4 311 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 SLC23A1Q9UHI7 598 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 SLC25A15Q9Y619 301 aa13.39□□□□□ -0.27
SNX13-204ENST00000444712 KIR2DS1A0A191URI9 304 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 MSTNO14793 375 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 IFNA7P01567 189 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 KITLGP21583 273 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 S100A1P23297 94 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 KIR2DS4P43632 304 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 KIR2DS1Q14954 304 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 DAZAP2Q15038 168 aaPredicted RBP13.38□□□□□ -0.27
SNX13-204ENST00000444712 TBR1Q16650 682 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 TEX261Q6UWH6 196 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 GSG1LQ6UXU4 331 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 KCTD9Q7L273 389 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 OR8G5Q8NG78 346 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 RAB18Q9NP72 206 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 TMEM100Q9NV29 134 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 PURGQ9UJV8 347 aaKnown RBP13.38□□□□□ -0.27
SNX13-204ENST00000444712 U3KQ87 197 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 DMXL1Q9Y485 3027 aa13.38□□□□□ -0.27
SNX13-204ENST00000444712 FXYD6-FXYD2A0A087WZ82 144 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 PRRG2O14669 202 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 ACAA1P09110 424 aaPredicted RBP13.37□□□□□ -0.27
SNX13-204ENST00000444712 RPA2P15927 270 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 GCH1P30793 250 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 UCNP55089 124 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 ERVS71-1P61550 626 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 MZT1Q08AG7 82 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 BAMBIQ13145 260 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 BRICD5Q6PL45 260 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 FIP1L1Q6UN15 594 aaKnown RBP13.37□□□□□ -0.27
SNX13-204ENST00000444712 CLEC18BQ6UXF7 455 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 SGPP2Q8IWX5 399 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 NEK7Q8TDX7 302 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 DYRK2Q92630 601 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 C1QTNF6Q9BXI9 259 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 FXYD6Q9H0Q3 95 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 PIGMQ9H3S5 423 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 LUZP4Q9P127 313 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 IGHV2OR16-5A0A0B4J2B6 119 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 IGHV1-18A0A0C4DH31 117 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 F8VVB4 439 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 F8VWA3 439 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 NAPSAO96009 420 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 CTXN2P0C2S0 81 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 MDH2P40926 338 aaKnown RBP13.37□□□□□ -0.27
SNX13-204ENST00000444712 UCP3P55916 312 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 SORDQ00796 357 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 OPCMLQ14982 345 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 PDCD1Q15116 288 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 MBNL2Q5VZF2 373 aaKnown RBP13.37□□□□□ -0.27
SNX13-204ENST00000444712 BATF2Q8N1L9 274 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 SCCPDHQ8NBX0 429 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 LILRB4Q8NHJ6 448 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 MUCL1Q96DR8 90 aa13.37□□□□□ -0.27
SNX13-204ENST00000444712 URB1O60287 2271 aaKnown RBP13.37□□□□□ -0.27
SNX13-204ENST00000444712 TRBV6-6A0A0A6YYG2 114 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 H7C1Q1 480 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 ARPC5O15511 151 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 ZNF728P0DKX0 622 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 SLC25A4P12235 298 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 GLRA1P23415 457 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 SSTR2P30874 369 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 S100A11P31949 105 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 TMEM65Q6PI78 240 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 PIK3IP1Q96FE7 263 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 VRK1Q99986 396 aaPredicted RBP13.36□□□□□ -0.27
SNX13-204ENST00000444712 USB1Q9BQ65 265 aaKnown RBP13.36□□□□□ -0.27
SNX13-204ENST00000444712 NMES1Q9C002 83 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 CXXC4Q9H2H0 198 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 HEXA-AS1Q9H8Q6 139 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 Q9N2K0 584 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 C1orf123Q9NWV4 160 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 SPEF1Q9Y4P9 236 aa13.36□□□□□ -0.27
SNX13-204ENST00000444712 FAM221AA4D161 298 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 C5orf51A6NDU8 294 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 TIMM8AO60220 97 aaPredicted RBP13.35□□□□□ -0.27
SNX13-204ENST00000444712 IFNA2P01563 188 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 CXCL2P19875 107 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 RBMXP38159 391 aaKnown RBP13.35□□□□□ -0.27
SNX13-204ENST00000444712 MPV17P39210 176 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 TDGF1P3P51864 188 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 TMPRSS3P57727 454 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 HERV-K104P61576 105 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 SUPT4H1P63272 117 aaKnown RBP13.35□□□□□ -0.27
SNX13-204ENST00000444712 SLC38A6Q8IZM9 456 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 SUMF2Q8NBJ7 301 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 MOB3AQ96BX8 217 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 WDR89Q96FK6 387 aaPredicted RBP13.35□□□□□ -0.27
SNX13-204ENST00000444712 WDR13Q9H1Z4 485 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 TREM2Q9NZC2 230 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 KCNIP3Q9Y2W7 256 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 FAM25EA8MYX2 175 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 CCSO14618 274 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 NOS1APO75052 506 aaPredicted RBP13.35□□□□□ -0.27
SNX13-204ENST00000444712 PGA5P0DJD9 388 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 PI3P19957 117 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 ZNF154Q13106 437 aa13.35□□□□□ -0.27
SNX13-204ENST00000444712 SLC9A3R2Q15599 337 aa13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms