RNA–Protein interactions for RNA: ENST00000443561.3

PDLIM2-212, Transcript of PDZ and LIM domain 2, humanhuman

TSL 2 BASIC

Gene PDLIM2, Length 701 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-212ENST00000443561 PPP3R1P63098 170 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 SPIN3Q5JUX0 258 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 CD276Q5ZPR3 534 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 BTNL3Q6UXE8 466 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 CEACAM19Q7Z692 300 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 RTN4RL2Q86UN3 420 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 NR2C2APQ86WQ0 139 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 OR8H2Q8N162 312 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 TMEM104Q8NE00 496 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 OR4M1Q8NGD0 313 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 COQ2Q96H96 371 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 SLC6A7Q99884 636 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 ESM1Q9NQ30 184 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 ATRQ13535 2644 aa10.54□□□□□ -0.72
PDLIM2-212ENST00000443561 CENPVL3A0A0U1RRI6 287 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 TRIM64CA6NLI5 447 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 RNASEK-C17orf49H0YIS7 233 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 GPR37O15354 613 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 RGS9O75916 674 aaPredicted RBP10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 VENTXO95231 258 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 CHRM2P08172 466 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 GABRA5P31644 462 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 SRP14P37108 136 aaKnown RBP10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 MTNR1BP49286 362 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 NHLRC3Q5JS37 347 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 C1orf100Q5SVJ3 147 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 TMEM200BQ69YZ2 307 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 VMO1Q7Z5L0 202 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 KIR3DL3Q8N743 410 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 ASCC1Q8N9N2 400 aaKnown RBP10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 PLPPR1Q8TBJ4 325 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 PHYHIPQ92561 330 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 SLC25A28Q96A46 364 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 AJUBAQ96IF1 538 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 SNX22Q96L94 193 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 GPER1Q99527 375 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 PCGF1Q9BSM1 259 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 MRI1Q9BV20 369 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 FAM192AQ9GZU8 254 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 FAM234AQ9H0X4 552 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 SIRT7Q9NRC8 400 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 KPTNQ9Y664 436 aa10.53□□□□□ -0.72
PDLIM2-212ENST00000443561 A0A0G2JK05 382 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 TOX4O94842 621 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 LIPFP07098 398 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 OCMP0CE72 109 aaPredicted RBP10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 SMIM18P0DKX4 95 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 SRMP19623 302 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 MAPK3P27361 379 aaPredicted RBP10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 RBM11P57052 281 aaKnown RBP10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 QRFPP83859 136 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 HSD17B12Q53GQ0 312 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 UTF1Q5T230 341 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 SYT6Q5T7P8 510 aaPredicted RBP10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 SIGIRRQ6IA17 410 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 BRD3OSQ6XYD6 125 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 C9orf139Q6ZV77 190 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 FAM185AQ8N0U4 392 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 PNKDQ8N490 385 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 PIP4P2Q8N4L2 257 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 SVOPQ8N4V2 548 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 JAGN1Q8N5M9 183 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 PNLDC1Q8NA58 520 aaKnown RBP10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 NANPQ8TBE9 248 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 PPA2Q9H2U2 334 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 UNKLQ9H9P5 680 aaKnown RBP10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 RHOFQ9HBH0 211 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 EXOSC4Q9NPD3 245 aaKnown RBP10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 ONECUT1Q9UBC0 465 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 NUP50Q9UKX7 468 aa10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 MRPS28Q9Y2Q9 187 aaKnown RBP10.52□□□□□ -0.73
PDLIM2-212ENST00000443561 TRBV23-1A0A0A0MS06 115 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 MMP23AO75900 390 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 HTR3BO95264 441 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 CYB5AP00167 134 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 SERPINA2P20848 420 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 PSMB9P28065 219 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 GDNFP39905 211 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 CAPZA1P52907 286 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 OR10A3P58181 314 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 RPL31P62899 125 aaKnown RBP10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 PLA2G7Q13093 441 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 UNC119Q13432 240 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 IL13RA2Q14627 380 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 SLC22A6Q4U2R8 563 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 OR10K2Q6IF99 312 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 GLIPR1L1Q6UWM5 242 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 BAIAP2L2Q6UXY1 529 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 CDH26Q8IXH8 852 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 NKAIN3Q8N8D7 197 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 TBC1D15Q8TC07 691 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 DMRTB1Q96MA1 342 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 NR1H4Q96RI1 486 aaPredicted RBP10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 MDFIQ99750 246 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 RNF167Q9H6Y7 350 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 ZNF696Q9H7X3 374 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 ING4Q9UNL4 249 aa10.51□□□□□ -0.73
PDLIM2-212ENST00000443561 A0A0A6YYD4 124 aa10.5□□□□□ -0.73
PDLIM2-212ENST00000443561 TRDV1A0A1B0GX56 115 aa10.5□□□□□ -0.73
PDLIM2-212ENST00000443561 C17orf98A8MV24 154 aa10.5□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 38 ms