RNA–Protein interactions for RNA: ENST00000442054.5

CDC42BPA-208, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best)

Gene CDC42BPA, Length 3,786 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-208ENST00000442054 TSEN15Q8WW01 171 aaKnown RBP6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZDHHC16Q969W1 377 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM45BQ96B21 275 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 DCAF16Q9NXF7 216 aa6.34□□□□□ -1.4
CDC42BPA-208ENST00000442054 PCSK5Q92824 1860 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 TRAV18A0A075B6X5 111 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR6C6A6NF89 314 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 TRAF3IP2O43734 574 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 TTRP02766 147 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 HTR2CP28335 458 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 PRSS3P35030 304 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 TAS2R19P59542 299 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 SUPT4H1P63272 117 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 SCGB2A2Q13296 93 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR2T2Q6IF00 324 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 DEGS2Q6QHC5 323 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 SKA3Q8IX90 412 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 PHYHIPLQ96FC7 376 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF416Q9BWM5 594 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 PLA2G2EQ9NZK7 142 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 GLS2Q9UI32 602 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 CFAP47Q6ZTR5 3102 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 MEIS3P1A6NDR6 274 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 H0YIZ8 118 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 M0R135 149 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 RP2O75695 350 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 GOSR1O95249 250 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 SELEP16581 610 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 THBS4P35443 961 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 GABRA2P47869 451 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 DAZAP2Q15038 168 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 PNLIPRP3Q17RR3 467 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 NCMAPQ5T1S8 102 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 C11orf87Q6NUJ2 197 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 FIP1L1Q6UN15 594 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 DCXRQ7Z4W1 244 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 ADGRE4PQ86SQ3 457 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 LHFPL1Q86WI0 220 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR1F12Q8NHA8 337 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 THRSPQ92748 146 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 RAB39BQ96DA2 213 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF799Q96GE5 643 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 CNTD2Q9H8S5 307 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 BEX4Q9NWD9 120 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF224Q9NZL3 707 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 IGKV3D-15A0A087WSY6 115 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 HAX1O00165 279 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 ACHEP22303 614 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 GLYATL3Q5SZD4 288 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 C16orf54Q6UWD8 224 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 HOGA1Q86XE5 327 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 C20orf196Q8IYI0 205 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF454Q8N9F8 522 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR13G1Q8NGZ3 307 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 SLC25A40Q8TBP6 338 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 H1FXQ92522 213 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 APOBEC3DQ96AK3 386 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 ADAT3Q96EY9 351 aaPredicted RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 RRNAD1Q96FB5 475 aaKnown RBP6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 SCRT1Q9BWW7 348 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 LINC00470Q9BZP3 86 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 CST11Q9H112 138 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 MSL2Q9HCI7 577 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 PPP1R3CQ9UQK1 317 aa6.33□□□□□ -1.4
CDC42BPA-208ENST00000442054 NCKAP5O14513 1909 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM82A0PJX8 343 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 C9orf170A2RU37 121 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 M0QYG6 137 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 RER1O15258 196 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 SIGLEC5O15389 551 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 BCL2L11O43521 198 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 CD2P06729 351 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 VSIG8P0DPA2 414 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 GTF2F2P13984 249 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 NUP62P37198 522 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 GSK3AP49840 483 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 MRPS34P82930 218 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 PLAC9Q5JTB6 97 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 AVPI1Q5T686 147 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 LPCAT3Q6P1A2 487 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 C17orf107Q6ZR85 190 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZCCHC24Q8N2G6 241 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZDHHC22Q8N966 263 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ADAD2Q8NCV1 583 aaKnown RBP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 CMBLQ96DG6 245 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 COMMD4Q9H0A8 199 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ZNF319Q9P2F9 582 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 CGGBP1Q9UFW8 167 aaPredicted RBP6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR5H14A6NHG9 310 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 UCP2P55851 309 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 TMEM50BP56557 158 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 KRTAP10-9P60411 292 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 BTN1A1Q13410 526 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 FBXL19-AS1Q494R0 122 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 CLVS2Q5SYC1 327 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 LYG2Q86SG7 212 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 ADPRHL1Q8NDY3 354 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR4S1Q8NGB4 309 aa6.32□□□□□ -1.4
CDC42BPA-208ENST00000442054 OR10Z1Q8NGY1 313 aa6.32□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms