RNA–Protein interactions for RNA: ENST00000440899.5

UBE2D4-204, Transcript of ubiquitin conjugating enzyme E2 D4 (putative), humanhuman

TSL 5

Gene UBE2D4, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4-204ENST00000440899 HMG20AQ9NP66 347 aa9.33□□□□□ -0.92
UBE2D4-204ENST00000440899 NECAP2Q9NVZ3 263 aa9.33□□□□□ -0.92
UBE2D4-204ENST00000440899 DPM3Q9P2X0 92 aa9.33□□□□□ -0.92
UBE2D4-204ENST00000440899 ZNF281Q9Y2X9 895 aa9.33□□□□□ -0.92
UBE2D4-204ENST00000440899 DSCAML1Q8TD84 2053 aa9.33□□□□□ -0.92
UBE2D4-204ENST00000440899 TRGV10A0A0A0MS01 117 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 MMP23AO75900 390 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 ISG15P05161 165 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 OCM2P0CE71 109 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 OCMP0CE72 109 aaPredicted RBP9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 ATF1P18846 271 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 BRS3P32247 399 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 OR3A1P47881 315 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 RASSF2P50749 326 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 ARHGDIBP52566 201 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 LOXL3P58215 753 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 CD83Q01151 205 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 BDH1Q02338 343 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 ZNF85Q03923 595 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 C1orf146Q5VVC0 180 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 FDX2Q6P4F2 183 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 RTN4RL2Q86UN3 420 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 WFDC9Q8NEX5 89 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 OR4P4Q8NGL7 312 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 ZNF596Q8TC21 504 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 MRAPQ8TCY5 172 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 CAPSLQ8WWF8 208 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 TRUB1Q8WWH5 349 aaKnown RBP9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 CORO2AQ92828 525 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 STMN2Q93045 179 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 RNF166Q96A37 237 aaPredicted RBP9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 CENPNQ96H22 339 aaPredicted RBP9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 OSBPL10Q9BXB5 764 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 GAL3ST2Q9H3Q3 398 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 LIN7BQ9HAP6 207 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 RHOFQ9HBH0 211 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 EXOSC4Q9NPD3 245 aaKnown RBP9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 FRRS1LQ9P0K9 344 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 ZKSCAN7Q9P0L1 754 aaPredicted RBP9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 OAZ3Q9UMX2 235 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 PCDHGB5Q9Y5G0 923 aa9.32□□□□□ -0.92
UBE2D4-204ENST00000440899 DAPL1A0PJW8 107 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 SIRPB1O00241 398 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 OR2H2O95918 312 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 MT-ND2P03891 347 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 CALCBP10092 127 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 CDK2P24941 298 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 LMO1P25800 156 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 CEACAM3P40198 252 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 CCR9P51686 369 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 SNU13P55769 128 aaKnown RBP9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 KPNB1Q14974 876 aaKnown RBP9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 TMEM95Q3KNT9 176 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 PRAMEF5Q5TYX0 476 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 CENPVQ7Z7K6 275 aaPredicted RBP9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 CREB3L1Q96BA8 519 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 PHF21AQ96BD5 680 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 OPALINQ96PE5 141 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 MBOAT4Q96T53 435 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 NEK6Q9HC98 313 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 IMPAD1Q9NX62 359 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 TAS2R3Q9NYW6 316 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 HHLA2Q9UM44 414 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 GSTK1Q9Y2Q3 226 aa9.31□□□□□ -0.92
UBE2D4-204ENST00000440899 IGKV1-12A0A0C4DH73 117 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 A0A1W2PRX2 142 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 LEUTXA8MZ59 168 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 SLC16A6O15403 523 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 ATP5HO75947 161 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 IGKV1D-12P01611 117 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 IGLV1-47P01700 117 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 HTR1AP08908 422 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 CD33P20138 364 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 CD24P25063 80 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 CD34P28906 385 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 GLIPR1P48060 266 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 NANOS3P60323 173 aaKnown RBP9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 AESQ08117 197 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 SLC25A30Q5SVS4 291 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 SAXO1Q8IYX7 474 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 RFT1Q96AA3 541 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 COMMD4Q9H0A8 199 aa9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 AURKAIP1Q9NWT8 199 aaPredicted RBP9.3□□□□□ -0.92
UBE2D4-204ENST00000440899 TCRBV4S1A1TA0A5B7 111 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 ODAMA1E959 279 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 SAC3D1A6NKF1 404 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 J3QRE1 110 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 DYNC1I1O14576 645 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 TOR1AO14656 332 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 KDM4BO94953 1096 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 OR2F2O95006 317 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 ALX3O95076 343 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 CSN2P05814 226 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 ZNF44P15621 663 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 PRRX1P54821 245 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 SNRPGP62308 76 aaKnown RBP9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 SCN1BQ07699 218 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 ABCA11PQ4W5N1 156 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 MEDAGQ5VYS4 303 aa9.29□□□□□ -0.92
UBE2D4-204ENST00000440899 FOXB2Q5VYV0 432 aa9.29□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 65.5 ms