RNA–Protein interactions for RNA: ENST00000439468.1

VPS41-207, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 5

Gene VPS41, Length 354 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-207ENST00000439468 POLR3AO14802 1390 aaPredicted RBP1.86□□□□□ -2.11
VPS41-207ENST00000439468 NBPF19A0A087WUL8 3843 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 VPS8Q8N3P4 1428 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 LOC102724200A0A096LPH7 203 aaPredicted RBP1.86□□□□□ -2.11
VPS41-207ENST00000439468 IGHV1-3A0A0C4DH29 117 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 CENPXA8MT69 81 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 C16orf90A8MZG2 172 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 GATBO75879 557 aaKnown RBP1.86□□□□□ -2.11
VPS41-207ENST00000439468 STAG3L2P0CL84 134 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 NTF3P20783 257 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 CD9P21926 228 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 IVDP26440 423 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 CSKP41240 450 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 ATP5J2P56134 94 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 TAS2R43P59537 309 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 XIAPP98170 497 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 FUT5Q11128 374 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 SLC35D2Q76EJ3 337 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 ERO1BQ86YB8 467 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 ARHGAP18Q8N392 663 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 ST20-AS1Q8NBB2 130 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 CYB561A3Q8NBI2 242 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 OR4M2Q8NGB6 313 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 NDNFQ8TB73 568 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 ING5Q8WYH8 240 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 C20orf144Q9BQM9 153 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 RHOXF2Q9BQY4 288 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 EMC6Q9BV81 110 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 PORCNQ9H237 461 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 OR51B5Q9H339 312 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 DHCR7Q9UBM7 475 aaKnown RBP1.86□□□□□ -2.11
VPS41-207ENST00000439468 KLF12Q9Y4X4 402 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 OTOFQ9HC10 1997 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 PTPRZ1P23471 2315 aaPredicted RBP1.86□□□□□ -2.11
VPS41-207ENST00000439468 KIAA1671Q9BY89 1806 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 TECTAO75443 2155 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 CACNA1HO95180 2353 aa1.86□□□□□ -2.11
VPS41-207ENST00000439468 DDX60Q8IY21 1712 aaKnown RBP1.86□□□□□ -2.11
VPS41-207ENST00000439468 AK9Q5TCS8 1911 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 RAB3GAP2Q9H2M9 1393 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 MYO9BQ13459 2157 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 ABCA12Q86UK0 2595 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 CEP250Q9BV73 2442 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 HECTD1Q9ULT8 2610 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 IGKV1D-17A0A075B6S4 117 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 A0A1W2PRF3 423 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 A0A1W2PRM7 423 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 ISPDA4D126 451 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 J3QT63 122 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 K7EN84 100 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 CHMP2AO43633 222 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 TRAPPC6AO75865 159 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 PLEKHA8P1O95397 391 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 ETHE1O95571 254 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 TTC4O95801 387 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 IGKV1-17P01599 117 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 IGKV1D-16P01601 117 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 GFAPP14136 432 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 CPN2P22792 545 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 PAX6P26367 422 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 PSMB5P28074 263 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 GNRHRP30968 328 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 PCK1P35558 622 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 GDI2P50395 445 aaKnown RBP1.85□□□□□ -2.11
VPS41-207ENST00000439468 HCCSP53701 268 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 MTPNP58546 118 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 TAS2R39P59534 338 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 SP6Q3SY56 376 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 KPRPQ5T749 579 aaPredicted RBP1.85□□□□□ -2.11
VPS41-207ENST00000439468 MFSD14CQ5VZR4 134 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 DEGS2Q6QHC5 323 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 USP50Q70EL3 339 aaPredicted RBP1.85□□□□□ -2.11
VPS41-207ENST00000439468 SLC7A5P1Q8MH63 180 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 OR2Z1Q8NG97 314 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 OR51A7Q8NH64 312 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 ENKURQ8TC29 256 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 CACNG8Q8WXS5 425 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 CENPNQ96H22 339 aaPredicted RBP1.85□□□□□ -2.11
VPS41-207ENST00000439468 IFNKQ9P0W0 207 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 CHTOPQ9Y3Y2 248 aaKnown RBP1.85□□□□□ -2.11
VPS41-207ENST00000439468 RALGAPA2Q2PPJ7 1873 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 LAMA5O15230 3695 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 LOXHD1Q8IVV2 1947 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 BAZ2AQ9UIF9 1905 aaKnown RBP1.85□□□□□ -2.11
VPS41-207ENST00000439468 SPTBN2O15020 2390 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 KIF24Q5T7B8 1368 aa1.85□□□□□ -2.11
VPS41-207ENST00000439468 FREM2Q5SZK8 3169 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 DAPK1P53355 1430 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 TMEM131Q92545 1883 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 IGSF10Q6WRI0 2623 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 TRAV8-6A0A0B4J262 113 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 IGHV2OR16-5A0A0B4J2B6 119 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 TVP23AA6NH52 213 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 ZNF98A6NK75 572 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 MYL12BO14950 172 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 KDELR3O43731 214 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 OTCP00480 354 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 CSTAP01040 98 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 LHBP01229 141 aa1.84□□□□□ -2.11
VPS41-207ENST00000439468 SLC35G6P0C7Q6 338 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms