RNA–Protein interactions for RNA: ENST00000439374.6

CDC42SE1-202, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene CDC42SE1, Length 3,498 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-202ENST00000439374 PBDC1Q9BVG4 233 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 SLC35B3Q9H1N7 401 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 MUC22E2RYF6 1773 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 A0A1W2PPQ1 181 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 A6NNC1 897 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 JTBO76095 146 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 SCGB1D1O95968 90 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 H2AFB1P0C5Y9 115 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 RPL29P47914 159 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 GNMTQ14749 295 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR8G1Q15617 311 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 SLC22A25Q6T423 547 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 RPS19BP1Q86WX3 136 aaKnown RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 IL1F10Q8WWZ1 152 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 PIGCQ92535 297 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 PACRGQ96M98 296 aaPredicted RBP8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 SLCO5A1Q9H2Y9 848 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 CBLN4Q9NTU7 201 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 C1orf123Q9NWV4 160 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 IL17BQ9UHF5 180 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 GPR132Q9UNW8 380 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 KCNIP3Q9Y2W7 256 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 LHFPL6Q9Y693 200 aa8.68□□□□□ -1.02
CDC42SE1-202ENST00000439374 CXCL13O43927 109 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 HPNP05981 417 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 DEFA4P12838 97 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 TMEM267Q0VDI3 215 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 COL19A1Q14993 1142 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 Q3ZCU0 254 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF705AQ6ZN79 300 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZDHHC22Q8N966 263 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 CCNL2Q96S94 520 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 KCNK17Q96T54 332 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF816-ZNF321PA0A0X1KG74 233 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 FTCDNL1E5RQL4 147 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 TERTO14746 1132 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 HSD17B6O14756 317 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 TRGC1P0CF51 173 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 IAPPP10997 89 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 TCN2P20062 427 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 DDTP30046 118 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 SULT1A2P50226 295 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 TGFBR3Q03167 851 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 LINC00696Q6ZRV3 163 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 EDAQ92838 391 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 NIPSNAP3BQ9BS92 247 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 PLCE1Q9P212 2302 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 METTL1Q9UBP6 276 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 MCTS1Q9ULC4 181 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 LAMP3Q9UQV4 416 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 CEBPZOSA8MTT3 80 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 NPIPB7O75200 414 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF728P0DKX0 622 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 SNCAP37840 140 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 MMP16P51512 607 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 HERV-K104P61576 105 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 HGFACQ04756 655 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF154Q13106 437 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 PLPPR5Q32ZL2 321 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 WIPI1Q5MNZ9 446 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF468Q5VIY5 522 aaPredicted RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 FIP1L1Q6UN15 594 aaKnown RBP8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 TMPRSS7Q7RTY8 843 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 THNSL2Q86YJ6 484 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 PLPP5Q8NEB5 264 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 NOXO1Q8NFA2 376 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR10S1Q8NGN2 331 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 OR5C1Q8NGR4 320 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 KCNG3Q8TAE7 436 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 RNF133Q8WVZ7 376 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 THRSPQ92748 146 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 NMES1Q9C002 83 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 WSB1Q9Y6I7 421 aa8.67□□□□□ -1.02
CDC42SE1-202ENST00000439374 PCNX1Q96RV3 2341 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 A0A1B0GUS0 222 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 A0A1W2PQD3 144 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 IFITM10A6NMD0 228 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 RBMXL2O75526 392 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 GALNSP34059 522 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 RTP5Q14D33 572 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 KISS1Q15726 138 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF124Q15973 351 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 THEM4Q5T1C6 240 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 BTNL8Q6UX41 500 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 ARRDC1Q8N5I2 433 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF845Q96IR2 970 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 SGCZQ96LD1 299 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 DCHS1Q96JQ0 3298 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 FREM1Q5H8C1 2179 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 ZNF729A6NN14 1252 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 HIST1H2BKO60814 126 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 SNAPC5O75971 98 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 HIST1H2BJP06899 126 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 CSRP1P21291 193 aaKnown RBP8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 HIST1H2BOP23527 126 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 EPHA8P29322 1005 aaPredicted RBP8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 HIST1H2BBP33778 126 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 HTR5AP47898 357 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 HIST1H2BDP58876 126 aa8.66□□□□□ -1.02
CDC42SE1-202ENST00000439374 HIST1H2BCP62807 126 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.3 ms