RNA–Protein interactions for RNA: ENST00000439274.6

APP-208, Transcript of amyloid beta precursor protein, humanhuman

TSL 1 (best) BASIC

Gene APP, Length 2,517 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-208ENST00000439274 CXCL13O43927 109 aa13.29□□□□□ -0.28
APP-208ENST00000439274 CBR3O75828 277 aa13.29□□□□□ -0.28
APP-208ENST00000439274 IFNA4P05014 189 aa13.29□□□□□ -0.28
APP-208ENST00000439274 GLAP06280 429 aa13.29□□□□□ -0.28
APP-208ENST00000439274 DAZAP2Q15038 168 aaPredicted RBP13.29□□□□□ -0.28
APP-208ENST00000439274 EXT1Q16394 746 aa13.29□□□□□ -0.28
APP-208ENST00000439274 UBALD2Q8IYN6 164 aa13.29□□□□□ -0.28
APP-208ENST00000439274 OR14L1PQ8NHC6 308 aa13.29□□□□□ -0.28
APP-208ENST00000439274 MAFAQ8NHW3 353 aaPredicted RBP13.29□□□□□ -0.28
APP-208ENST00000439274 SIT1Q9Y3P8 196 aa13.29□□□□□ -0.28
APP-208ENST00000439274 NCKAP5O14513 1909 aa13.28□□□□□ -0.28
APP-208ENST00000439274 hCG_38984A0A1B0GV85 526 aa13.28□□□□□ -0.28
APP-208ENST00000439274 hCG_1809904A0A1W2PP81 198 aa13.28□□□□□ -0.28
APP-208ENST00000439274 A0A1W2PR64 198 aa13.28□□□□□ -0.28
APP-208ENST00000439274 A0A1W2PRV1 198 aa13.28□□□□□ -0.28
APP-208ENST00000439274 ZNF716A6NP11 495 aa13.28□□□□□ -0.28
APP-208ENST00000439274 PDCD6O75340 191 aa13.28□□□□□ -0.28
APP-208ENST00000439274 OR7C1O76099 320 aaPredicted RBP13.28□□□□□ -0.28
APP-208ENST00000439274 IGHV3-9P01782 118 aa13.28□□□□□ -0.28
APP-208ENST00000439274 KLK3P07288 261 aaPredicted RBP13.28□□□□□ -0.28
APP-208ENST00000439274 RFPL3SP0C7P2 107 aa13.28□□□□□ -0.28
APP-208ENST00000439274 UCP2P55851 309 aa13.28□□□□□ -0.28
APP-208ENST00000439274 CARD18P57730 90 aa13.28□□□□□ -0.28
APP-208ENST00000439274 RAC3P60763 192 aa13.28□□□□□ -0.28
APP-208ENST00000439274 HERV-K104P61576 105 aa13.28□□□□□ -0.28
APP-208ENST00000439274 MALLQ13021 153 aa13.28□□□□□ -0.28
APP-208ENST00000439274 CLINT1Q14677 625 aa13.28□□□□□ -0.28
APP-208ENST00000439274 CEACAM16Q2WEN9 425 aa13.28□□□□□ -0.28
APP-208ENST00000439274 GPR157Q5UAW9 335 aa13.28□□□□□ -0.28
APP-208ENST00000439274 AAED1Q7RTV5 226 aa13.28□□□□□ -0.28
APP-208ENST00000439274 FAM213BQ8TBF2 198 aa13.28□□□□□ -0.28
APP-208ENST00000439274 IFT22Q9H7X7 185 aa13.28□□□□□ -0.28
APP-208ENST00000439274 NKX2-6A6NCS4 301 aa13.28□□□□□ -0.28
APP-208ENST00000439274 FAM24AA6NFZ4 105 aa13.28□□□□□ -0.28
APP-208ENST00000439274 UMAD1C9J7I0 102 aa13.28□□□□□ -0.28
APP-208ENST00000439274 ARG1P05089 322 aa13.28□□□□□ -0.28
APP-208ENST00000439274 OR13C7P0DN81 318 aa13.28□□□□□ -0.28
APP-208ENST00000439274 TCN2P20062 427 aa13.28□□□□□ -0.28
APP-208ENST00000439274 GGNQ86UU5 652 aa13.28□□□□□ -0.28
APP-208ENST00000439274 CD300LFQ8TDQ1 290 aa13.28□□□□□ -0.28
APP-208ENST00000439274 FOXB1Q99853 325 aa13.28□□□□□ -0.28
APP-208ENST00000439274 OR2H1Q9GZK4 316 aa13.28□□□□□ -0.28
APP-208ENST00000439274 CELSR3Q9NYQ7 3312 aa13.27□□□□□ -0.28
APP-208ENST00000439274 EDN3P14138 238 aa13.27□□□□□ -0.29
APP-208ENST00000439274 PAX6P26367 422 aa13.27□□□□□ -0.29
APP-208ENST00000439274 GLP1RP43220 463 aa13.27□□□□□ -0.29
APP-208ENST00000439274 RBM11P57052 281 aaKnown RBP13.27□□□□□ -0.29
APP-208ENST00000439274 MLF1P58340 268 aa13.27□□□□□ -0.29
APP-208ENST00000439274 B2MP61769 119 aa13.27□□□□□ -0.29
APP-208ENST00000439274 EWSR1Q01844 656 aaKnown RBP eCLIP13.27□□□□□ -0.29
APP-208ENST00000439274 IL13RA2Q14627 380 aa13.27□□□□□ -0.29
APP-208ENST00000439274 HMGN3Q15651 99 aa13.27□□□□□ -0.29
APP-208ENST00000439274 SLC16A13Q7RTY0 426 aa13.27□□□□□ -0.29
APP-208ENST00000439274 AGBL5Q8NDL9 886 aa13.27□□□□□ -0.29
APP-208ENST00000439274 OR4D5Q8NGN0 318 aa13.27□□□□□ -0.29
APP-208ENST00000439274 M1APQ8TC57 530 aa13.27□□□□□ -0.29
APP-208ENST00000439274 NTNG2Q96CW9 530 aa13.27□□□□□ -0.29
APP-208ENST00000439274 SYT3Q9BQG1 590 aa13.27□□□□□ -0.29
APP-208ENST00000439274 ABHD14AQ9BUJ0 271 aa13.27□□□□□ -0.29
APP-208ENST00000439274 RSRP1Q9BUV0 290 aa13.27□□□□□ -0.29
APP-208ENST00000439274 SF3B5Q9BWJ5 86 aaKnown RBP13.27□□□□□ -0.29
APP-208ENST00000439274 SLC7A11Q9UPY5 501 aa13.27□□□□□ -0.29
APP-208ENST00000439274 SLC33A1O00400 549 aaPredicted RBP13.27□□□□□ -0.29
APP-208ENST00000439274 PPYP01298 95 aa13.27□□□□□ -0.29
APP-208ENST00000439274 OMGP23515 440 aa13.27□□□□□ -0.29
APP-208ENST00000439274 FUT6P51993 359 aa13.27□□□□□ -0.29
APP-208ENST00000439274 EIF2S3LQ2VIR3 472 aaKnown RBP13.27□□□□□ -0.29
APP-208ENST00000439274 KRTAP27-1Q3LI81 207 aa13.27□□□□□ -0.29
APP-208ENST00000439274 SLC23A3Q6PIS1 610 aa13.27□□□□□ -0.29
APP-208ENST00000439274 SLC25A26Q70HW3 274 aa13.27□□□□□ -0.29
APP-208ENST00000439274 NANPQ8TBE9 248 aa13.27□□□□□ -0.29
APP-208ENST00000439274 CPT1CQ8TCG5 803 aa13.27□□□□□ -0.29
APP-208ENST00000439274 RARRES2Q99969 163 aa13.27□□□□□ -0.29
APP-208ENST00000439274 C3orf85A0A1B0GTC6 90 aa13.26□□□□□ -0.29
APP-208ENST00000439274 A0A1W2PPE2 198 aa13.26□□□□□ -0.29
APP-208ENST00000439274 C5orf52A6NGY3 159 aa13.26□□□□□ -0.29
APP-208ENST00000439274 GPR37O15354 613 aa13.26□□□□□ -0.29
APP-208ENST00000439274 POLR2GP62487 172 aaKnown RBP eCLIP13.26□□□□□ -0.29
APP-208ENST00000439274 IL11RAQ14626 422 aa13.26□□□□□ -0.29
APP-208ENST00000439274 ZNF611Q8N823 705 aa13.26□□□□□ -0.29
APP-208ENST00000439274 BOD1Q96IK1 185 aa13.26□□□□□ -0.29
APP-208ENST00000439274 MAGT1Q9H0U3 335 aa13.26□□□□□ -0.29
APP-208ENST00000439274 CCDC163A0A0D9SF12 145 aa13.26□□□□□ -0.29
APP-208ENST00000439274 IGSF23A1L1A6 192 aa13.26□□□□□ -0.29
APP-208ENST00000439274 GJE1A6NN92 205 aa13.26□□□□□ -0.29
APP-208ENST00000439274 MPPED1O15442 326 aa13.26□□□□□ -0.29
APP-208ENST00000439274 F10P00742 488 aa13.26□□□□□ -0.29
APP-208ENST00000439274 MT-ND4LP03901 98 aa13.26□□□□□ -0.29
APP-208ENST00000439274 CCL20P78556 96 aa13.26□□□□□ -0.29
APP-208ENST00000439274 WIPI1Q5MNZ9 446 aaPredicted RBP13.26□□□□□ -0.29
APP-208ENST00000439274 FAM24BQ8N5W8 94 aa13.26□□□□□ -0.29
APP-208ENST00000439274 COMMD1Q8N668 190 aa13.26□□□□□ -0.29
APP-208ENST00000439274 HS3ST6Q96QI5 342 aa13.26□□□□□ -0.29
APP-208ENST00000439274 TMED3Q9Y3Q3 217 aa13.26□□□□□ -0.29
APP-208ENST00000439274 C9J4A7 227 aa13.25□□□□□ -0.29
APP-208ENST00000439274 TRAPPC6AO75865 159 aa13.25□□□□□ -0.29
APP-208ENST00000439274 NXPH3O95157 252 aa13.25□□□□□ -0.29
APP-208ENST00000439274 S100A6P06703 90 aa13.25□□□□□ -0.29
APP-208ENST00000439274 CYC1P08574 325 aa13.25□□□□□ -0.29
APP-208ENST00000439274 FUT3P21217 361 aa13.25□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms