RNA–Protein interactions for RNA: ENST00000439160.6

TCOF1-205, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 4,644 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-205ENST00000439160 THADAQ6YHU6 1953 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 DIDO1Q9BTC0 2240 aaKnown RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 TRBV5-5A0A0J9YX44 114 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 A8MXE2 369 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 ONECUT2O95948 504 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 HLA-DQB1P01920 261 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 RTL8BQ17RB0 113 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 SLC36A1Q7Z2H8 476 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF75AQ96N20 296 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 HDHD3Q9BSH5 251 aaPredicted RBP10.75□□□□□ -0.69
TCOF1-205ENST00000439160 C20orf24Q9BUV8 137 aa10.75□□□□□ -0.69
TCOF1-205ENST00000439160 SNRNP200O75643 2136 aaKnown RBP10.74□□□□□ -0.69
TCOF1-205ENST00000439160 GNG10P50151 68 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 ERGIC1Q969X5 290 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 MALSU1Q96EH3 234 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF488Q96MN9 340 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 FAM117AQ9C073 453 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 CLEC18AA5D8T8 446 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 NDUFB3O43676 98 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 CBR1P16152 277 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 SPICQ8N5J4 248 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 CLEC18CQ8NCF0 446 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 OR4D10Q8NGI6 311 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 PRSS50Q9UI38 385 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF724A8MTY0 619 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 TMEM229AB2RXF0 380 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 BCL2L11O43521 198 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 IGF2P01344 180 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 CD1AP06126 327 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 HAGHQ16775 308 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 FAM214BQ7L5A3 538 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 MOB1BQ7L9L4 216 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 C2CD4CQ8TF44 421 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 PINX1Q96BK5 328 aaKnown RBP10.74□□□□□ -0.69
TCOF1-205ENST00000439160 PFDN5Q99471 154 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 GPR27Q9NS67 375 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 STRAPQ9Y3F4 350 aaKnown RBP10.74□□□□□ -0.69
TCOF1-205ENST00000439160 PKDREJQ9NTG1 2253 aa10.74□□□□□ -0.69
TCOF1-205ENST00000439160 A0A1W2PNV4 684 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 GALR2O43603 387 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-205ENST00000439160 COL19A1Q14993 1142 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 GGNBP1Q5YKI7 109 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 LYG1Q8N1E2 194 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 RPS4Y2Q8TD47 263 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 GNPNAT1Q96EK6 184 aaPredicted RBP10.73□□□□□ -0.69
TCOF1-205ENST00000439160 NIPSNAP3BQ9BS92 247 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 RTN4RQ9BZR6 473 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 SLC25A32Q9H2D1 315 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 CXXC4Q9H2H0 198 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 MPC2O95563 127 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 Q3ZCU0 254 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 MRPL14Q6P1L8 145 aaKnown RBP10.73□□□□□ -0.69
TCOF1-205ENST00000439160 RND1Q92730 232 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 NAA60Q9H7X0 242 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 RAB18Q9NP72 206 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 SHISA3A0PJX4 238 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 ADAM20O43506 726 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 LRRC10Q5BKY1 277 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 C9orf152Q5JTZ5 239 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 TMEM123Q8N131 208 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 PIK3IP1Q96FE7 263 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF426Q9BUY5 554 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 C3orf85A0A1B0GTC6 90 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 GPR37O15354 613 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 CLLU1Q5K131 121 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 CLEC18BQ6UXF7 455 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 SIGLEC12Q96PQ1 595 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 GNG13Q9P2W3 67 aa10.73□□□□□ -0.69
TCOF1-205ENST00000439160 A0A0U1RQV5 110 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 J3QT63 122 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 AQP7O14520 342 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 FCGR3BO75015 233 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 CELA3AP09093 270 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 EIF2S3LQ2VIR3 472 aaKnown RBP10.72□□□□□ -0.69
TCOF1-205ENST00000439160 MOGAT2Q3SYC2 334 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 INO80CQ6PI98 192 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-205ENST00000439160 OR5A2Q8NGI9 324 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 ASB13Q8WXK3 278 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 GUCD1Q96NT3 240 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 LAMP3Q9UQV4 416 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 TMED3Q9Y3Q3 217 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF883P0CG24 379 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 SULT1A3P0DMM9 295 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 SULT1A4P0DMN0 295 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 C19orf57Q0VDD7 668 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 TEX30Q5JUR7 227 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 FAM219AQ8IW50 185 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 SLC25A38Q96DW6 304 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 ADGRG7Q96K78 797 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 OR2D2Q9H210 308 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 FREM3P0C091 2139 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 RSPO4Q2I0M5 234 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF528Q3MIS6 628 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 MOGAT3Q86VF5 341 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 ANGPTL6Q8NI99 470 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 ST7LQ8TDW4 575 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 LHX4Q969G2 390 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 ZNF629Q9UEG4 869 aaPredicted RBP10.72□□□□□ -0.69
TCOF1-205ENST00000439160 KCNK7Q9Y2U2 307 aa10.72□□□□□ -0.69
TCOF1-205ENST00000439160 IGKV1D-43A0A0B4J1Z2 117 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 46.6 ms