RNA–Protein interactions for RNA: ENST00000439008.1

LINC00399-201, long intergenic non-protein coding RNA 399, humanhuman

TSL 2 BASIC

Gene LINC00399, Length 414 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00399-201ENST00000439008 PAX6P26367 422 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 MAP2K4P45985 399 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 BAMBIQ13145 260 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 SPHARQ15513 63 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 UNQ9370/PRO34162Q6UXP9 181 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 Q8NFD4 153 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 FAM216AQ8WUB2 273 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 TNFAIP8L1Q8WVP5 186 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 MYDGFQ969H8 173 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 SNX22Q96L94 193 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 MND1Q9BWT6 205 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 SCN3BQ9NY72 215 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 ERGIC3Q9Y282 383 aa10.84□□□□□ -0.67
LINC00399-201ENST00000439008 A0A0G2JK05 382 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 A0A1W2PP11 408 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 CYB5AP00167 134 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 CD2P06729 351 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 MELTFP08582 738 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 FSTP19883 344 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 GABRR1P24046 479 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 LMO1P25800 156 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 TGFBR2P37173 567 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 VHLP40337 213 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 PTGFRP43088 359 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 EDDM3BP56851 147 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 TAS2R43P59537 309 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 BDH1Q02338 343 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 EDDM3AQ14507 147 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 PIGYQ3MUY2 71 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 SPIN3Q5JUX0 258 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 LDLRAD2Q5SZI1 272 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 DDI2Q5TDH0 399 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 ELP2Q6IA86 826 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 Q6YL49 198 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 CMTM4Q8IZR5 234 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 PXT1Q8NFP0 134 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 ZFAND2BQ8WV99 257 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 COQ2Q96H96 371 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 ZNF184Q99676 751 aaPredicted RBP10.83□□□□□ -0.68
LINC00399-201ENST00000439008 VCX3BQ9H321 246 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 METTL8Q9H825 291 aaKnown RBP10.83□□□□□ -0.68
LINC00399-201ENST00000439008 NOX4Q9NPH5 578 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 TMEM138Q9NPI0 162 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 TNFRSF19Q9NS68 423 aa10.83□□□□□ -0.68
LINC00399-201ENST00000439008 TRAV24A0A0B4J272 114 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 C17orf98A8MV24 154 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 TRIM77I1YAP6 450 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 SLC33A1O00400 549 aaPredicted RBP10.82□□□□□ -0.68
LINC00399-201ENST00000439008 NPFFO15130 113 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 RGS10O43665 173 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 SC5DO75845 299 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 MMP23AO75900 390 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 BDKRB2P30411 391 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 GLIPR1P48060 266 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 HSPA13P48723 471 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 BPIFB3P59826 476 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 SCN1BQ07699 218 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 MED22Q15528 200 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 GRK1Q15835 563 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 UTF1Q5T230 341 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 BAIAP2L2Q6UXY1 529 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 ZNF782Q6ZMW2 699 aaPredicted RBP10.82□□□□□ -0.68
LINC00399-201ENST00000439008 OR51T1Q8NGJ9 327 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 NR1H4Q96RI1 486 aaPredicted RBP10.82□□□□□ -0.68
LINC00399-201ENST00000439008 GPER1Q99527 375 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 PPA2Q9H2U2 334 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 EXOSC4Q9NPD3 245 aaKnown RBP10.82□□□□□ -0.68
LINC00399-201ENST00000439008 RAB26Q9ULW5 256 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 RRP15Q9Y3B9 282 aaKnown RBP10.82□□□□□ -0.68
LINC00399-201ENST00000439008 TPRKBQ9Y3C4 175 aa10.82□□□□□ -0.68
LINC00399-201ENST00000439008 SH2D1BO14796 132 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 IGHV4-59P01825 116 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 RNASE1P07998 156 aaKnown RBP10.81□□□□□ -0.68
LINC00399-201ENST00000439008 ZNF728P0DKX0 622 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 SAA4P35542 130 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 ZNF93P35789 620 aaPredicted RBP10.81□□□□□ -0.68
LINC00399-201ENST00000439008 GDNFP39905 211 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 MTNR1BP49286 362 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 BMXP51813 675 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 UBE2E1P51965 193 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 PPP3R1P63098 170 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 AESQ08117 197 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 ACSM3Q53FZ2 586 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 LIPKQ5VXJ0 399 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 RBMS3Q6XE24 437 aaKnown RBP10.81□□□□□ -0.68
LINC00399-201ENST00000439008 TMEM91Q6ZNR0 172 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 GDPD3Q7L5L3 318 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 PRSS48Q7RTY5 328 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 OR4D6Q8NGJ1 314 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 OR5D13Q8NGL4 314 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 JMJD8Q96S16 334 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 TMED9Q9BVK6 235 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 CHIAQ9BZP6 476 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 FAM192AQ9GZU8 254 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 RHOFQ9HBH0 211 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 ING4Q9UNL4 249 aa10.81□□□□□ -0.68
LINC00399-201ENST00000439008 SF3B6Q9Y3B4 125 aaKnown RBP10.81□□□□□ -0.68
LINC00399-201ENST00000439008 TMEM89A2RUT3 159 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 CLDN34H7C241 214 aa10.8□□□□□ -0.68
LINC00399-201ENST00000439008 MGST3O14880 152 aa10.8□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 64.8 ms