RNA–Protein interactions for RNA: ENST00000438518.5

HDAC6-208, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-208ENST00000438518 PIGYQ3MUY2 71 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 LRRC10Q5BKY1 277 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 FAM89BQ8N5H3 189 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 CD177Q8N6Q3 437 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 OR56B1Q8NGI3 324 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 OR5D13Q8NGL4 314 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 LGALS14Q8TCE9 139 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 SNX22Q96L94 193 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 GAFA1Q96PS6 74 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 LPAR5Q9H1C0 372 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 BANF2Q9H503 90 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 IL36RNQ9UBH0 155 aa15.34■□□□□ 0.05
HDAC6-208ENST00000438518 A8MXK9 166 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 GEMIN2O14893 280 aaKnown RBP15.33■□□□□ 0.04
HDAC6-208ENST00000438518 OR7C1O76099 320 aaPredicted RBP15.33■□□□□ 0.04
HDAC6-208ENST00000438518 CSN2P05814 226 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 SNRPBP14678 240 aaKnown RBP15.33■□□□□ 0.04
HDAC6-208ENST00000438518 AMY2BP19961 511 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 RBMXP38159 391 aaKnown RBP15.33■□□□□ 0.04
HDAC6-208ENST00000438518 PITPNBP48739 271 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 SNU13P55769 128 aaKnown RBP15.33■□□□□ 0.04
HDAC6-208ENST00000438518 LMO4P61968 165 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 COL10A1Q03692 680 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 TAF9Q16594 264 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 ESCO2Q56NI9 601 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 OR10K2Q6IF99 312 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 RAB12Q6IQ22 244 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 Q6P435 159 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 SPNS3Q6ZMD2 512 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 CCL13Q99616 98 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 NUDT16L1Q9BRJ7 211 aaKnown RBP15.33■□□□□ 0.04
HDAC6-208ENST00000438518 RCC2Q9P258 522 aaKnown RBP15.33■□□□□ 0.04
HDAC6-208ENST00000438518 MAB21L2Q9Y586 359 aa15.33■□□□□ 0.04
HDAC6-208ENST00000438518 FLNBO75369 2602 aaKnown RBP15.33■□□□□ 0.04
HDAC6-208ENST00000438518 A0A0A6YYH2 397 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 A6NJ64 397 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 GNB2P62879 340 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 RBM39Q14498 530 aaKnown RBP15.32■□□□□ 0.04
HDAC6-208ENST00000438518 ARL6IP1Q15041 203 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 LYPD2Q6UXB3 125 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 RAB40AQ8WXH6 277 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 C1orf159Q96HA4 380 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 NARFLQ9H6Q4 476 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 CTSZQ9UBR2 303 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 CLN8Q9UBY8 286 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 A3GALT2U3KPV4 340 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 CSMD1Q96PZ7 3565 aa15.32■□□□□ 0.04
HDAC6-208ENST00000438518 A0A075B6Q4 140 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 FUOMA2VDF0 154 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 RNF223E7ERA6 249 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 K7N7A8 449 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 SLC33A1O00400 549 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-208ENST00000438518 PDCD6O75340 191 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 ZNF737O75373 536 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 FOXH1O75593 365 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 ECDO95905 644 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-208ENST00000438518 PAHP00439 452 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 TK1P04183 234 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 GABRR1P24046 479 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 DUSP1P28562 367 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 PAX5Q02548 391 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 UBE2NLQ5JXB2 153 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 CD276Q5ZPR3 534 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 ZNF841Q6ZN19 808 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 OR8H2Q8N162 312 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 FAM216BQ8N7L0 139 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 ASCC1Q8N9N2 400 aaKnown RBP15.31■□□□□ 0.04
HDAC6-208ENST00000438518 PHF21AQ96BD5 680 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 DMRTB1Q96MA1 342 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 SSBP3Q9BWW4 388 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-208ENST00000438518 ABCG5Q9H222 651 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 KCNK15Q9H427 330 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 RHBDL2Q9NX52 303 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 SLC25A10Q9UBX3 287 aaPredicted RBP15.31■□□□□ 0.04
HDAC6-208ENST00000438518 HSF4Q9ULV5 492 aa15.31■□□□□ 0.04
HDAC6-208ENST00000438518 A0A0B4J203 849 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 SIRPB1O00241 398 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 DVL1O14640 695 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 MGST3O14880 152 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 CA11O75493 328 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 FUT3P21217 361 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 CEBPDP49716 269 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-208ENST00000438518 FOXB2Q5VYV0 432 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 WDR25Q64LD2 544 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-208ENST00000438518 ZNRF1Q8ND25 227 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 TMEM185AQ8NFB2 350 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 NEDD4LQ96PU5 975 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 SLIRPQ9GZT3 109 aaKnown RBP15.3■□□□□ 0.04
HDAC6-208ENST00000438518 ADAM30Q9UKF2 790 aa15.3■□□□□ 0.04
HDAC6-208ENST00000438518 POLR3KQ9Y2Y1 108 aaPredicted RBP15.3■□□□□ 0.04
HDAC6-208ENST00000438518 TRBV23-1A0A0A0MS06 115 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 TRAV24A0A0B4J272 114 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 MCRIP1C9JLW8 97 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 APOA1P02647 267 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 ERP29P30040 261 aaKnown RBP15.29■□□□□ 0.04
HDAC6-208ENST00000438518 GZMKP49863 264 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 SCN1BQ07699 218 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 PAN3Q58A45 887 aaKnown RBP15.29■□□□□ 0.04
HDAC6-208ENST00000438518 ATAD3CQ5T2N8 411 aa15.29■□□□□ 0.04
HDAC6-208ENST00000438518 C17orf107Q6ZR85 190 aa15.29■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51 ms