RNA–Protein interactions for RNA: ENST00000438395.5

VPS50-204, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 3

Gene VPS50, Length 538 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-204ENST00000438395 IGHV2-26A0A0B4J1V2 119 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 A0A1B0GTI1 187 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 TCRBV3S1A0A5B6 114 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 METTL15A6NJ78 407 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 MGST3O14880 152 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 ZNF737O75373 536 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 SRSF10O75494 262 aaKnown RBP6.25□□□□□ -1.41
VPS50-204ENST00000438395 SULT1C4O75897 302 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 T-ENOLP0DO92 83 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 FCGR1AP12314 374 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 PRKACAP17612 351 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 CCL1P22362 96 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 CEACAM3P40198 252 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 RBP2P50120 134 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 SNU13P55769 128 aaKnown RBP6.25□□□□□ -1.41
VPS50-204ENST00000438395 DLX6P56179 175 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 MTCP1P56278 107 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 P2RX3P56373 397 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 ERVK11-1P61568 191 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 SPIN3Q5JUX0 258 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 C16orf82Q7Z2V1 217 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 OR5AU1Q8NGC0 362 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 OR4X2Q8NGF9 303 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 ZNF596Q8TC21 504 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 PIFOQ8TCI5 191 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 DPF1Q92782 380 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 STMN2Q93045 179 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 CREB3L1Q96BA8 519 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 C10orf35Q96D05 121 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 MRPL48Q96GC5 212 aaKnown RBP6.25□□□□□ -1.41
VPS50-204ENST00000438395 CHST6Q9GZX3 395 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 TMEM133Q9H2Q1 129 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 SERTAD4Q9NUC0 356 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 IMPAD1Q9NX62 359 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 GNG8Q9UK08 70 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 POMPQ9Y244 141 aa6.25□□□□□ -1.41
VPS50-204ENST00000438395 TRBV2A0A0J9YWF9 115 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 A0A1W2PQL4 384 aaPredicted RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 TCRBV4S1A1TA0A5B7 111 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 ZAR1LA6NP61 321 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 SIRPB1O00241 398 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 TOR1AO14656 332 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 SH2D1BO14796 132 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 MITFO75030 526 aaPredicted RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 APOL3O95236 402 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 OR2T7P0C7T2 308 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 FASP25445 335 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 DUSP1P28562 367 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 HTR1FP30939 366 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 MNDAP41218 407 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 DAPP51397 102 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 CDC42P60953 191 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 SLC35A2P78381 396 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 BNIP1Q12981 228 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 RBM39Q14498 530 aaKnown RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 KPNB1Q14974 876 aaKnown RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 UBE2V2Q15819 145 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 ATP6AP1Q15904 470 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 TMEM95Q3KNT9 176 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 C9orf152Q5JTZ5 239 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 PRAMEF5Q5TYX0 476 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 AADACL4Q5VUY2 407 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 C12orf73Q69YU5 71 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 CCDC144NLQ6NUI1 221 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 CCDC121Q6ZUS5 278 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 CENPVQ7Z7K6 275 aaPredicted RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 CATSPERDQ86XM0 798 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 MRPL41Q8IXM3 137 aaKnown RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 FAM58AQ8N1B3 248 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 DYNAPQ8N1N2 210 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 C11orf42Q8N5U0 333 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 TPRX1Q8N7U7 411 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 DNAAF1Q8NEP3 725 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 PHF21AQ96BD5 680 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 Q96M66 194 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 MYCBPQ99417 103 aaPredicted RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 GPR61Q9BZJ8 451 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 RIBC2Q9H4K1 309 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 EXOSC4Q9NPD3 245 aaKnown RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 RBFOX1Q9NWB1 397 aaKnown RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 MTCH1Q9NZJ7 389 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 DPM3Q9P2X0 92 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 ZNF281Q9Y2X9 895 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 UBE2J1Q9Y385 318 aaPredicted RBP6.24□□□□□ -1.41
VPS50-204ENST00000438395 ORC6Q9Y5N6 252 aa6.24□□□□□ -1.41
VPS50-204ENST00000438395 NBEAL2Q6ZNJ1 2754 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 TMEM82A0PJX8 343 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 LEUTXA8MZ59 168 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 F8VVB4 439 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 F8VWA3 439 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 M0QZK8 103 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 ZNF44P15621 663 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 BCL3P20749 454 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 CDK2P24941 298 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 PTGFRP43088 359 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 RASSF2P50749 326 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 BLCAPP62952 87 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 ZNF91Q05481 1191 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 SCN1BQ07699 218 aa6.23□□□□□ -1.41
VPS50-204ENST00000438395 TMED1Q13445 227 aa6.23□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms