RNA–Protein interactions for RNA: ENST00000437316.6

HLA-DQB2-232, Transcript of major histocompatibility complex, class II, DQ beta 2, humanhuman

APPRIS P1 BASIC

Gene HLA-DQB2, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB2-232ENST00000437316 HSMCR30P0CW71 290 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 PRTN3P24158 256 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 PTGFRP43088 359 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ERVFRD-1P60508 538 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ZP1P60852 638 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 UBA52P62987 128 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 MEF2CQ06413 473 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 RUSC1-AS1Q66K80 236 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TRAPPC6BQ86SZ2 158 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 PHC2Q8IXK0 858 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 PDZD9Q8IXQ8 264 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 JAGN1Q8N5M9 183 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 NKAIN3Q8N8D7 197 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 OR52N4Q8NGI2 321 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 GCDHQ92947 438 aaPredicted RBP11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 UNKLQ9H9P5 680 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ING4Q9UNL4 249 aa11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 RRP15Q9Y3B9 282 aaKnown RBP11.76□□□□□ -0.53
HLA-DQB2-232ENST00000437316 IGKV1-12A0A0C4DH73 117 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 MEGF11A6BM72 1044 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 DEGS1O15121 323 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 NPFFO15130 113 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 OR2H2O95918 312 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 IGKV1D-12P01611 117 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 FBP1P09467 338 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 CALCBP10092 127 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 CRHBPP24387 322 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TGFBR2P37173 567 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 UBE2E1P51965 193 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 GPR50Q13585 617 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 DOC2BQ14184 412 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 GPR176Q14439 515 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TRAM1Q15629 374 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 DEFB112Q30KQ8 113 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TMEM200BQ69YZ2 307 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ELP2Q6IA86 826 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 PRSS48Q7RTY5 328 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 SSMEM1Q8WWF3 244 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 DERL3Q96Q80 235 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 NR1H4Q96RI1 486 aaPredicted RBP11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 CHST6Q9GZX3 395 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 SLITRK2Q9H156 845 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 DUSP21Q9H596 190 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TCF7L1Q9HCS4 588 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 IL36RNQ9UBH0 155 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 FOXJ3Q9UPW0 622 aa11.75□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TRGV10A0A0A0MS01 117 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TRBV5-7A0A0A0MS05 114 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TMEM82A0PJX8 343 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 CLDN34H7C241 214 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 GPX5O75715 221 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 HTR3BO95264 441 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 RBP4P02753 201 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ZNF728P0DKX0 622 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 PSMA1P25786 263 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 LGALS4P56470 323 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 RPS11P62280 158 aaKnown RBP eCLIP11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 IL13RA2Q14627 380 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 PAN3Q58A45 887 aaKnown RBP11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 Q8N7P7 452 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ZDHHC22Q8N966 263 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ZNF714Q96N38 554 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 OR5M11Q96RB7 305 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TMED9Q9BVK6 235 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 DPAGT1Q9H3H5 408 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 GAL3ST2Q9H3Q3 398 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 IL36GQ9NZH8 169 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 LINC00312Q9Y6C7 94 aa11.74□□□□□ -0.53
HLA-DQB2-232ENST00000437316 MEIOCA2RUB1 952 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 CUBNO60494 3623 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 CRYBA1P05813 215 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 RNASE1P07998 156 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 IGFBP3P17936 291 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ERP29P30040 261 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 OR3A4PP47883 348 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 P2RX3P56373 397 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 KLRD1Q13241 179 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 IRF3Q14653 427 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 MIDNQ504T8 468 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ACSM3Q53FZ2 586 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 C12orf54Q6X4T0 127 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 C17orf107Q6ZR85 190 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 LINC00596Q86U02 117 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 CDH26Q8IXH8 852 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 SVOPQ8N4V2 548 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TMEM86BQ8N661 226 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 OR13D1Q8NGV5 346 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ZNF48Q96MX3 618 aaPredicted RBP11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 DUX5Q96PT3 197 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 PPA2Q9H2U2 334 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ISYNA1Q9NPH2 558 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 ESM1Q9NQ30 184 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 MRPS28Q9Y2Q9 187 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 LSM2Q9Y333 95 aaKnown RBP11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 POMT1Q9Y6A1 747 aa11.73□□□□□ -0.53
HLA-DQB2-232ENST00000437316 DSCAML1Q8TD84 2053 aa11.72□□□□□ -0.53
HLA-DQB2-232ENST00000437316 TRAV8-7A0A075B6U6 113 aa11.72□□□□□ -0.53
HLA-DQB2-232ENST00000437316 A0A0U1RQK1 487 aa11.72□□□□□ -0.53
HLA-DQB2-232ENST00000437316 MDFIC2A0A1B0GVS7 189 aa11.72□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms