RNA–Protein interactions for RNA: ENST00000435532.7

NEDD4-202, Transcript of neural precursor cell expressed, developmentally down-regulated 4, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD4, Length 5,869 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD4-202ENST00000435532 SMIM10L1P0DMW3 83 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 ADIRFQ15847 76 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 SMIM10Q96HG1 83 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 SLC52A3Q9NQ40 469 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 DXOO77932 396 aaKnown RBP13.69□□□□□ -0.22
NEDD4-202ENST00000435532 FAM122CQ6P4D5 195 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 GREB1LQ9C091 1923 aaPredicted RBP13.69□□□□□ -0.22
NEDD4-202ENST00000435532 OIP5O43482 229 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 MT-ND4LP03901 98 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 SEMG1P04279 462 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 DAOP14920 347 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 SLC25A42Q86VD7 318 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 CDH26Q8IXH8 852 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 OR8D4Q8NGM9 314 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 ADAMTS17Q8TE56 1095 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 MAGT1Q9H0U3 335 aa13.69□□□□□ -0.22
NEDD4-202ENST00000435532 MIOXQ9UGB7 285 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 C3orf85A0A1B0GTC6 90 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 SLC26A10Q8NG04 563 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 TMEM208Q9BTX3 173 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 IGHV3OR15-7A0A075B7D8 119 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 PMELP40967 661 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 RAB40CQ96S21 281 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 SLC7A10Q9NS82 523 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 PRSS50Q9UI38 385 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF205O95201 554 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 CNN1P51911 297 aaKnown RBP13.68□□□□□ -0.22
NEDD4-202ENST00000435532 CCL8P80075 99 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 FAM27D1Q5T7N8 215 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 NCCRP1Q6ZVX7 275 aaPredicted RBP13.68□□□□□ -0.22
NEDD4-202ENST00000435532 VWCEQ96DN2 955 aa13.68□□□□□ -0.22
NEDD4-202ENST00000435532 GAR1Q9NY12 217 aaKnown RBP13.68□□□□□ -0.22
NEDD4-202ENST00000435532 A0A1W2PNV4 684 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF705FA8MVS1 300 aaPredicted RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF705DP0CH99 300 aaPredicted RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF705BP0CI00 300 aaPredicted RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 DCTDP32321 178 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 RPL31P62899 125 aaKnown RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 IGLV3-21P80748 117 aaPredicted RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 OR1L4Q8NGR5 311 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 FAM57AQ8TBR7 257 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 CHODLQ9H9P2 273 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 LSM2Q9Y333 95 aaKnown RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 A0A0G2JMZ2 1700 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 LRRC37A2A6NM11 1700 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 TRAPPC2P0DI81 140 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 TRAPPC2BP0DI82 140 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 SMIM18P0DKX4 95 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 GUCA2AQ02747 115 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 HGDQ93099 445 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 STARD10Q9Y365 291 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 SPAG17Q6Q759 2223 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 B9A039 149 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 KCNMB1Q16558 191 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 LHX4Q969G2 390 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF714Q96N38 554 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF230Q9UIE0 474 aaPredicted RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 CTRB1P17538 263 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 CTRB2Q6GPI1 263 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 S100A4P26447 101 aaKnown RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 KCNRGQ8N5I3 272 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 OR4D11Q8NGI4 311 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 FLYWCH2Q96CP2 140 aaKnown RBP13.67□□□□□ -0.22
NEDD4-202ENST00000435532 CHST5Q9GZS9 411 aa13.67□□□□□ -0.22
NEDD4-202ENST00000435532 CHEK1O14757 476 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 PRDX2P32119 198 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 RAB19A4D1S5 217 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 PSG4Q00888 419 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 FAAP20Q6NZ36 180 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 ZBTB34Q8NCN2 500 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 ATP5SQ99766 215 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 UQCC1Q9NVA1 299 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 OGG1O15527 345 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 CTAG2O75638 210 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 PAFAH1B2P68402 229 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 CELF2-AS1Q8N7Q2 184 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 OR5AP2Q8NGF4 316 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 OR2V2Q96R30 315 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 TIAF1O95411 115 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 FAM106CPP0CH98 169 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 VDAC1P21796 283 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 RPL7L1Q6DKI1 246 aaKnown RBP13.66□□□□□ -0.22
NEDD4-202ENST00000435532 RHOBP62745 196 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 COL10A1Q03692 680 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 SCARB1Q8WTV0 552 aa13.66□□□□□ -0.22
NEDD4-202ENST00000435532 ASAH2BP0C7U1 165 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 ZNF787Q6DD87 383 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 TMUB1Q9BVT8 246 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 ADAM19Q9H013 955 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 NAA60Q9H7X0 242 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 GNG13Q9P2W3 67 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 UBE2L5PA0A1B0GUS4 154 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 GYPAP02724 150 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 PDZK1IP1Q13113 114 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 AVPI1Q5T686 147 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 R3HDM4Q96D70 268 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 RNF2Q99496 336 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 TRBV5-3A0A0A0MS03 114 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 RAB5CP51148 216 aa13.65□□□□□ -0.22
NEDD4-202ENST00000435532 HLA-DRB3P79483 266 aa13.65□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms